Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC28A2O43868 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
SLC28A2O43868 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC28A2O43868 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SLC28A2O43868 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC28A2O43868 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC28A2O43868 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.9■□□□□ 0.3
SLC28A2O43868 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SLC28A2O43868 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC28A2O43868 AL591684.3-201ENST00000605187 298 ntBASIC16.9■□□□□ 0.3
SLC28A2O43868 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC28A2O43868 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC28A2O43868 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC28A2O43868 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A2O43868 OR6D1P-203ENST00000641209 4860 ntBASIC16.9■□□□□ 0.3
SLC28A2O43868 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SLC28A2O43868 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC28A2O43868 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC28A2O43868 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC28A2O43868 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC28A2O43868 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC28A2O43868 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC28A2O43868 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC28A2O43868 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.89■□□□□ 0.29
SLC28A2O43868 DNAJB3-201ENST00000446806 729 ntBASIC16.89■□□□□ 0.29
SLC28A2O43868 AC018712.1-201ENST00000455767 687 ntBASIC16.89■□□□□ 0.29
SLC28A2O43868 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC28A2O43868 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC28A2O43868 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC28A2O43868 AC239800.4-201ENST00000603712 296 ntBASIC16.89■□□□□ 0.29
SLC28A2O43868 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SLC28A2O43868 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SLC28A2O43868 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC28A2O43868 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
SLC28A2O43868 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 KRT18P55-202ENST00000578578 1546 ntBASIC16.89■□□□□ 0.29
SLC28A2O43868 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC28A2O43868 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A2O43868 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC28A2O43868 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SLC28A2O43868 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC28A2O43868 AC104109.2-201ENST00000602919 1418 ntBASIC16.88■□□□□ 0.29
SLC28A2O43868 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC28A2O43868 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC28A2O43868 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC28A2O43868 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLC28A2O43868 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 RPS2P28-201ENST00000314255 741 ntBASIC16.88■□□□□ 0.29
SLC28A2O43868 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC28A2O43868 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC28A2O43868 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC28A2O43868 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC28A2O43868 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC28A2O43868 FAM197Y3-203ENST00000618346 717 ntBASIC16.88■□□□□ 0.29
SLC28A2O43868 AC116407.3-201ENST00000623905 1129 ntBASIC16.88■□□□□ 0.29
SLC28A2O43868 FAM215A-202ENST00000632077 792 ntBASIC16.88■□□□□ 0.29
SLC28A2O43868 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms