Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.73■□□□□ 0.27
DUX1O43812 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.73■□□□□ 0.27
DUX1O43812 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.73■□□□□ 0.27
DUX1O43812 AC010654.1-201ENST00000615722 808 ntBASIC16.73■□□□□ 0.27
DUX1O43812 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
DUX1O43812 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.73■□□□□ 0.27
DUX1O43812 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 AC002310.6-201ENST00000624451 1377 ntBASIC16.73■□□□□ 0.27
DUX1O43812 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 BICD1-207ENST00000551848 1962 ntBASIC16.73■□□□□ 0.27
DUX1O43812 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.73■□□□□ 0.27
DUX1O43812 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.73■□□□□ 0.27
DUX1O43812 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.73■□□□□ 0.27
DUX1O43812 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.72■□□□□ 0.27
DUX1O43812 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.72■□□□□ 0.27
DUX1O43812 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
DUX1O43812 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
DUX1O43812 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
DUX1O43812 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.72■□□□□ 0.27
DUX1O43812 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 RPSAP43-201ENST00000402237 625 ntBASIC16.72■□□□□ 0.27
DUX1O43812 PTCHD3P3-201ENST00000403073 906 ntBASIC16.72■□□□□ 0.27
DUX1O43812 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.72■□□□□ 0.27
DUX1O43812 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.72■□□□□ 0.27
DUX1O43812 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.72■□□□□ 0.27
DUX1O43812 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 MTDHP5-201ENST00000598980 586 ntBASIC16.72■□□□□ 0.27
DUX1O43812 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.72■□□□□ 0.27
DUX1O43812 AC004790.2-201ENST00000623588 572 ntBASIC16.72■□□□□ 0.27
DUX1O43812 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.72■□□□□ 0.27
DUX1O43812 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.72■□□□□ 0.27
DUX1O43812 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.72■□□□□ 0.27
DUX1O43812 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.72■□□□□ 0.27
DUX1O43812 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUX1O43812 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.71■□□□□ 0.27
DUX1O43812 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
DUX1O43812 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
DUX1O43812 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.71■□□□□ 0.27
DUX1O43812 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.71■□□□□ 0.27
DUX1O43812 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.71■□□□□ 0.27
DUX1O43812 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.71■□□□□ 0.27
DUX1O43812 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.71■□□□□ 0.27
DUX1O43812 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.71■□□□□ 0.27
DUX1O43812 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.71■□□□□ 0.27
DUX1O43812 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.71■□□□□ 0.27
DUX1O43812 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.71■□□□□ 0.27
DUX1O43812 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.71■□□□□ 0.27
DUX1O43812 LINC01451-201ENST00000623792 534 ntBASIC16.71■□□□□ 0.27
DUX1O43812 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
DUX1O43812 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.71■□□□□ 0.27
DUX1O43812 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUX1O43812 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUX1O43812 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DUX1O43812 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.7■□□□□ 0.26
DUX1O43812 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.7■□□□□ 0.26
DUX1O43812 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms