Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH17O14917 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PCDH17O14917 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 AP000347.1-202ENST00000435868 847 ntBASIC16.74■□□□□ 0.27
PCDH17O14917 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.74■□□□□ 0.27
PCDH17O14917 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH17O14917 AL160237.2-201ENST00000556165 472 ntBASIC16.74■□□□□ 0.27
PCDH17O14917 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH17O14917 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH17O14917 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 AC104692.2-201ENST00000603054 253 ntBASIC16.74■□□□□ 0.27
PCDH17O14917 AL031008.1-201ENST00000619963 541 ntBASIC16.74■□□□□ 0.27
PCDH17O14917 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PCDH17O14917 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH17O14917 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PCDH17O14917 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDH17O14917 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PCDH17O14917 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH17O14917 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH17O14917 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
PCDH17O14917 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
PCDH17O14917 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH17O14917 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 AC009078.2-202ENST00000463353 338 ntBASIC16.73■□□□□ 0.27
PCDH17O14917 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDH17O14917 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.73■□□□□ 0.27
PCDH17O14917 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDH17O14917 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDH17O14917 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH17O14917 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH17O14917 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDH17O14917 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH17O14917 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDH17O14917 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PCDH17O14917 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PCDH17O14917 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH17O14917 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
PCDH17O14917 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH17O14917 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 AC096633.1-201ENST00000422446 749 ntBASIC16.72■□□□□ 0.27
PCDH17O14917 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDH17O14917 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH17O14917 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDH17O14917 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDH17O14917 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDH17O14917 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDH17O14917 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDH17O14917 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDH17O14917 INTS4P1-201ENST00000438455 1935 ntBASIC16.72■□□□□ 0.27
PCDH17O14917 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDH17O14917 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDH17O14917 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH17O14917 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDH17O14917 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms