Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC27.93■■■□□ 2.06
CHD1O14646 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CHD1O14646 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC27.93■■■□□ 2.06
CHD1O14646 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1O14646 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
CHD1O14646 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC27.92■■■□□ 2.06
CHD1O14646 AC022210.1-201ENST00000449856 793 ntBASIC27.92■■■□□ 2.06
CHD1O14646 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC27.92■■■□□ 2.06
CHD1O14646 MIR3909-201ENST00000579518 119 ntBASIC27.92■■■□□ 2.06
CHD1O14646 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC27.92■■■□□ 2.06
CHD1O14646 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC27.92■■■□□ 2.06
CHD1O14646 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC27.92■■■□□ 2.06
CHD1O14646 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC27.92■■■□□ 2.06
CHD1O14646 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC27.92■■■□□ 2.06
CHD1O14646 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
CHD1O14646 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1O14646 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1O14646 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1O14646 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1O14646 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1O14646 TTTY23B-201ENST00000442790 549 ntBASIC27.92■■■□□ 2.06
CHD1O14646 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC27.92■■■□□ 2.06
CHD1O14646 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC27.92■■■□□ 2.06
CHD1O14646 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1O14646 AC005412.3-201ENST00000580309 715 ntBASIC27.92■■■□□ 2.06
CHD1O14646 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC27.92■■■□□ 2.06
CHD1O14646 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC27.92■■■□□ 2.06
CHD1O14646 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CHD1O14646 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC27.91■■■□□ 2.06
CHD1O14646 EFTUD1P1-204ENST00000560401 1798 ntBASIC27.91■■■□□ 2.06
CHD1O14646 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CHD1O14646 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC27.91■■■□□ 2.06
CHD1O14646 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
CHD1O14646 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC27.91■■■□□ 2.06
CHD1O14646 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC27.91■■■□□ 2.06
CHD1O14646 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
CHD1O14646 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC27.91■■■□□ 2.06
CHD1O14646 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC27.91■■■□□ 2.06
CHD1O14646 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
CHD1O14646 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC27.9■■■□□ 2.06
CHD1O14646 RNU1-129P-201ENST00000384064 167 ntBASIC27.9■■■□□ 2.06
CHD1O14646 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
CHD1O14646 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC27.9■■■□□ 2.06
CHD1O14646 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC27.9■■■□□ 2.06
CHD1O14646 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC27.9■■■□□ 2.06
CHD1O14646 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC27.9■■■□□ 2.06
CHD1O14646 U1.21-201ENST00000580816 167 ntBASIC27.9■■■□□ 2.06
CHD1O14646 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC27.9■■■□□ 2.06
CHD1O14646 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CHD1O14646 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
CHD1O14646 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
CHD1O14646 RPF1-202ENST00000370656 724 ntTSL 2 BASIC27.89■■■□□ 2.06
CHD1O14646 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
CHD1O14646 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CHD1O14646 FOXO1B-201ENST00000504678 1527 ntBASIC27.89■■■□□ 2.06
CHD1O14646 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC27.89■■■□□ 2.06
CHD1O14646 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
CHD1O14646 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC27.89■■■□□ 2.06
CHD1O14646 AC008494.3-201ENST00000606615 944 ntBASIC27.89■■■□□ 2.06
CHD1O14646 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CHD1O14646 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC27.89■■■□□ 2.06
CHD1O14646 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
CHD1O14646 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC27.89■■■□□ 2.06
CHD1O14646 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC27.89■■■□□ 2.06
CHD1O14646 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC27.89■■■□□ 2.06
CHD1O14646 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
CHD1O14646 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC27.89■■■□□ 2.06
CHD1O14646 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC27.89■■■□□ 2.06
CHD1O14646 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
CHD1O14646 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC27.89■■■□□ 2.05
CHD1O14646 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC27.89■■■□□ 2.05
CHD1O14646 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
CHD1O14646 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.05
CHD1O14646 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC27.89■■■□□ 2.05
CHD1O14646 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.05
CHD1O14646 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
CHD1O14646 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC27.89■■■□□ 2.05
CHD1O14646 BID-204ENST00000399767 2129 ntTSL 2 BASIC27.89■■■□□ 2.05
CHD1O14646 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
CHD1O14646 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
CHD1O14646 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CHD1O14646 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CHD1O14646 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CHD1O14646 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC27.88■■■□□ 2.05
CHD1O14646 AL080243.2-201ENST00000418783 582 ntBASIC27.88■■■□□ 2.05
CHD1O14646 HLA-V-204ENST00000476601 1289 ntBASIC27.88■■■□□ 2.05
CHD1O14646 FAM8A2P-201ENST00000528813 1142 ntBASIC27.88■■■□□ 2.05
CHD1O14646 RARRES2P9-201ENST00000565168 469 ntBASIC27.88■■■□□ 2.05
CHD1O14646 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC27.88■■■□□ 2.05
CHD1O14646 RAB34-223ENST00000636154 730 ntTSL 2 BASIC27.88■■■□□ 2.05
CHD1O14646 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CHD1O14646 HNRNPRP1-201ENST00000453465 1695 ntBASIC27.88■■■□□ 2.05
CHD1O14646 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
CHD1O14646 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC27.88■■■□□ 2.05
CHD1O14646 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
CHD1O14646 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CHD1O14646 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CHD1O14646 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CHD1O14646 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CHD1O14646 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms