Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.27■□□□□ 0.2
CCDC160A6NGH7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 AC013268.1-206ENST00000638368 961 ntBASIC16.27■□□□□ 0.2
CCDC160A6NGH7 AC112229.1-201ENST00000639295 961 ntBASIC16.27■□□□□ 0.2
CCDC160A6NGH7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCDC160A6NGH7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC160A6NGH7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC160A6NGH7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC160A6NGH7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC160A6NGH7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC160A6NGH7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
CCDC160A6NGH7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC160A6NGH7 AC004854.2-201ENST00000608450 1441 ntBASIC16.27■□□□□ 0.19
CCDC160A6NGH7 AC093010.1-201ENST00000473625 1624 ntBASIC16.27■□□□□ 0.19
CCDC160A6NGH7 AC099063.4-201ENST00000641099 1602 ntBASIC16.27■□□□□ 0.19
CCDC160A6NGH7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 AC092384.3-202ENST00000564646 2873 ntBASIC16.26■□□□□ 0.19
CCDC160A6NGH7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 GUSBP5-201ENST00000418136 578 ntBASIC16.26■□□□□ 0.19
CCDC160A6NGH7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 AC007322.4-201ENST00000509611 723 ntBASIC16.26■□□□□ 0.19
CCDC160A6NGH7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCDC160A6NGH7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC160A6NGH7 AL160286.2-201ENST00000567150 934 ntBASIC16.25■□□□□ 0.19
CCDC160A6NGH7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms