Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRABD2BA6NFA1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 NOC2LP2-201ENST00000407594 1944 ntBASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 FAM58CP-201ENST00000435741 640 ntBASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 RPS15P9-201ENST00000494093 319 ntBASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 WIZP1-201ENST00000531444 2299 ntBASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRABD2BA6NFA1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 BCAR1-209ENST00000546196 1340 ntBASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 AC190387.1-201ENST00000551683 408 ntBASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 AC004835.2-201ENST00000603762 682 ntBASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 AC073592.5-201ENST00000624854 528 ntBASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.79■□□□□ 0.28
TRABD2BA6NFA1 BICD1-207ENST00000551848 1962 ntBASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 NOC2LP1-202ENST00000452600 2235 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms