Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.85■■□□□ 1.09
LAMB4A4D0S4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 AP002472.1-201ENST00000577490 586 ntBASIC21.84■■□□□ 1.09
LAMB4A4D0S4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 KRT18P32-201ENST00000424695 1287 ntBASIC21.84■■□□□ 1.09
LAMB4A4D0S4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.84■■□□□ 1.09
LAMB4A4D0S4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 AC116353.5-201ENST00000638148 1699 ntBASIC21.83■■□□□ 1.09
LAMB4A4D0S4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 NOC2LP1-202ENST00000452600 2235 ntBASIC21.83■■□□□ 1.09
LAMB4A4D0S4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 AC005412.3-201ENST00000580309 715 ntBASIC21.83■■□□□ 1.09
LAMB4A4D0S4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LAMB4A4D0S4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
LAMB4A4D0S4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
LAMB4A4D0S4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LAMB4A4D0S4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
LAMB4A4D0S4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LAMB4A4D0S4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 AL139400.1-201ENST00000366220 510 ntBASIC21.82■■□□□ 1.08
LAMB4A4D0S4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 AL627223.1-201ENST00000416693 442 ntBASIC21.82■■□□□ 1.08
LAMB4A4D0S4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 SNHG9-202ENST00000564014 471 ntBASIC21.82■■□□□ 1.08
LAMB4A4D0S4 MIR3909-201ENST00000579518 119 ntBASIC21.82■■□□□ 1.08
LAMB4A4D0S4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
LAMB4A4D0S4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
LAMB4A4D0S4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.81■■□□□ 1.08
LAMB4A4D0S4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms