Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHISA3A0PJX4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 BX088651.1-201ENST00000540551 451 ntBASIC15.26■□□□□ 0.03
SHISA3A0PJX4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 AC113410.3-201ENST00000623366 203 ntBASIC15.26■□□□□ 0.03
SHISA3A0PJX4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 OR6D1P-202ENST00000641007 5290 ntBASIC15.26■□□□□ 0.03
SHISA3A0PJX4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.26■□□□□ 0.03
SHISA3A0PJX4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 AL135905.2-201ENST00000584934 1404 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms