Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf4Q9NQ89 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C12orf4Q9NQ89 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C12orf4Q9NQ89 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
C12orf4Q9NQ89 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf4Q9NQ89 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
C12orf4Q9NQ89 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf4Q9NQ89 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf4Q9NQ89 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf4Q9NQ89 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf4Q9NQ89 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf4Q9NQ89 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C12orf4Q9NQ89 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
C12orf4Q9NQ89 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C12orf4Q9NQ89 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf4Q9NQ89 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf4Q9NQ89 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf4Q9NQ89 AC044849.2-201ENST00000606596 710 ntBASIC20.82■□□□□ 0.92
C12orf4Q9NQ89 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf4Q9NQ89 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
C12orf4Q9NQ89 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf4Q9NQ89 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf4Q9NQ89 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
C12orf4Q9NQ89 AC092803.2-201ENST00000564287 1899 ntBASIC20.81■□□□□ 0.92
C12orf4Q9NQ89 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf4Q9NQ89 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf4Q9NQ89 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf4Q9NQ89 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf4Q9NQ89 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C12orf4Q9NQ89 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
C12orf4Q9NQ89 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C12orf4Q9NQ89 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C12orf4Q9NQ89 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C12orf4Q9NQ89 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
C12orf4Q9NQ89 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C12orf4Q9NQ89 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.8■□□□□ 0.92
C12orf4Q9NQ89 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
C12orf4Q9NQ89 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.79■□□□□ 0.92
C12orf4Q9NQ89 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
C12orf4Q9NQ89 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
C12orf4Q9NQ89 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
C12orf4Q9NQ89 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.79■□□□□ 0.92
C12orf4Q9NQ89 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.79■□□□□ 0.92
C12orf4Q9NQ89 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
C12orf4Q9NQ89 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
C12orf4Q9NQ89 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.79■□□□□ 0.92
C12orf4Q9NQ89 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C12orf4Q9NQ89 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
C12orf4Q9NQ89 DUSP8P4-201ENST00000399538 1761 ntBASIC20.78■□□□□ 0.92
C12orf4Q9NQ89 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.78■□□□□ 0.92
C12orf4Q9NQ89 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.78■□□□□ 0.92
C12orf4Q9NQ89 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C12orf4Q9NQ89 AC142472.1-201ENST00000612013 1741 ntBASIC20.78■□□□□ 0.92
C12orf4Q9NQ89 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C12orf4Q9NQ89 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C12orf4Q9NQ89 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C12orf4Q9NQ89 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.77■□□□□ 0.92
C12orf4Q9NQ89 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C12orf4Q9NQ89 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.77■□□□□ 0.92
C12orf4Q9NQ89 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
C12orf4Q9NQ89 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
C12orf4Q9NQ89 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.76■□□□□ 0.91
C12orf4Q9NQ89 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C12orf4Q9NQ89 AL162393.1-201ENST00000437852 946 ntBASIC20.76■□□□□ 0.91
C12orf4Q9NQ89 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C12orf4Q9NQ89 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C12orf4Q9NQ89 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C12orf4Q9NQ89 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.75■□□□□ 0.91
C12orf4Q9NQ89 WHAMMP3-201ENST00000611636 1609 ntBASIC20.75■□□□□ 0.91
C12orf4Q9NQ89 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
C12orf4Q9NQ89 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C12orf4Q9NQ89 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
C12orf4Q9NQ89 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
C12orf4Q9NQ89 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C12orf4Q9NQ89 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C12orf4Q9NQ89 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
C12orf4Q9NQ89 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C12orf4Q9NQ89 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C12orf4Q9NQ89 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
C12orf4Q9NQ89 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
C12orf4Q9NQ89 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.74■□□□□ 0.91
C12orf4Q9NQ89 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C12orf4Q9NQ89 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C12orf4Q9NQ89 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 AC020928.2-201ENST00000588717 2197 ntBASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C12orf4Q9NQ89 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.72■□□□□ 0.91
C12orf4Q9NQ89 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C12orf4Q9NQ89 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
C12orf4Q9NQ89 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
C12orf4Q9NQ89 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms