Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNS1Q96KK3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNS1Q96KK3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KCNS1Q96KK3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.4■□□□□ 0.54
KCNS1Q96KK3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.4■□□□□ 0.54
KCNS1Q96KK3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNS1Q96KK3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
KCNS1Q96KK3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNS1Q96KK3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KCNS1Q96KK3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNS1Q96KK3 AP006261.1-201ENST00000584783 668 ntBASIC18.39■□□□□ 0.53
KCNS1Q96KK3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KCNS1Q96KK3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNS1Q96KK3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNS1Q96KK3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNS1Q96KK3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
KCNS1Q96KK3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.38■□□□□ 0.53
KCNS1Q96KK3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNS1Q96KK3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KCNS1Q96KK3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNS1Q96KK3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KCNS1Q96KK3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.37■□□□□ 0.53
KCNS1Q96KK3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
KCNS1Q96KK3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNS1Q96KK3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KCNS1Q96KK3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNS1Q96KK3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNS1Q96KK3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNS1Q96KK3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNS1Q96KK3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNS1Q96KK3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KCNS1Q96KK3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNS1Q96KK3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.36■□□□□ 0.53
KCNS1Q96KK3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.36■□□□□ 0.53
KCNS1Q96KK3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNS1Q96KK3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNS1Q96KK3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.35■□□□□ 0.53
KCNS1Q96KK3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNS1Q96KK3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNS1Q96KK3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNS1Q96KK3 CLDN5-201ENST00000403084 2357 ntBASIC18.34■□□□□ 0.53
KCNS1Q96KK3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
KCNS1Q96KK3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNS1Q96KK3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNS1Q96KK3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNS1Q96KK3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNS1Q96KK3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNS1Q96KK3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNS1Q96KK3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
KCNS1Q96KK3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
KCNS1Q96KK3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KCNS1Q96KK3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
KCNS1Q96KK3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNS1Q96KK3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNS1Q96KK3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNS1Q96KK3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.33■□□□□ 0.52
KCNS1Q96KK3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNS1Q96KK3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KCNS1Q96KK3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNS1Q96KK3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNS1Q96KK3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNS1Q96KK3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KCNS1Q96KK3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNS1Q96KK3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.31■□□□□ 0.52
KCNS1Q96KK3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNS1Q96KK3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNS1Q96KK3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.31■□□□□ 0.52
KCNS1Q96KK3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNS1Q96KK3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KCNS1Q96KK3 AC068473.5-201ENST00000616428 2072 ntBASIC18.3■□□□□ 0.52
KCNS1Q96KK3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KCNS1Q96KK3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.3■□□□□ 0.52
KCNS1Q96KK3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.3■□□□□ 0.52
KCNS1Q96KK3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KCNS1Q96KK3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KCNS1Q96KK3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
KCNS1Q96KK3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KCNS1Q96KK3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KCNS1Q96KK3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KCNS1Q96KK3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KCNS1Q96KK3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.28■□□□□ 0.52
KCNS1Q96KK3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KCNS1Q96KK3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KCNS1Q96KK3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KCNS1Q96KK3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KCNS1Q96KK3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KCNS1Q96KK3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KCNS1Q96KK3 AC044849.2-201ENST00000606596 710 ntBASIC18.27■□□□□ 0.52
KCNS1Q96KK3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNS1Q96KK3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNS1Q96KK3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
KCNS1Q96KK3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNS1Q96KK3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
KCNS1Q96KK3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNS1Q96KK3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
KCNS1Q96KK3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.26■□□□□ 0.51
KCNS1Q96KK3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNS1Q96KK3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.25■□□□□ 0.51
KCNS1Q96KK3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNS1Q96KK3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms