Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 MIR3648-1-201ENST00000615959 180 ntBASIC25.5■■□□□ 1.67
RNF25Q96BH1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF25Q96BH1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF25Q96BH1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF25Q96BH1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
RNF25Q96BH1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF25Q96BH1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.49■■□□□ 1.67
RNF25Q96BH1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF25Q96BH1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
RNF25Q96BH1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF25Q96BH1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
RNF25Q96BH1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF25Q96BH1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF25Q96BH1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF25Q96BH1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.48■■□□□ 1.67
RNF25Q96BH1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.48■■□□□ 1.67
RNF25Q96BH1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF25Q96BH1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF25Q96BH1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF25Q96BH1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF25Q96BH1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF25Q96BH1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF25Q96BH1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF25Q96BH1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF25Q96BH1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNF25Q96BH1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF25Q96BH1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNF25Q96BH1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
RNF25Q96BH1 AC016575.1-201ENST00000607026 382 ntBASIC25.46■■□□□ 1.67
RNF25Q96BH1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
RNF25Q96BH1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF25Q96BH1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNF25Q96BH1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF25Q96BH1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF25Q96BH1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF25Q96BH1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF25Q96BH1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF25Q96BH1 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF25Q96BH1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNF25Q96BH1 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF25Q96BH1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.45■■□□□ 1.66
RNF25Q96BH1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF25Q96BH1 ERN1-208ENST00000606895 2068 ntBASIC25.44■■□□□ 1.66
RNF25Q96BH1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.44■■□□□ 1.66
RNF25Q96BH1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
RNF25Q96BH1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.44■■□□□ 1.66
RNF25Q96BH1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.44■■□□□ 1.66
RNF25Q96BH1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF25Q96BH1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RNF25Q96BH1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF25Q96BH1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RNF25Q96BH1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
RNF25Q96BH1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.42■■□□□ 1.66
RNF25Q96BH1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RNF25Q96BH1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
RNF25Q96BH1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RNF25Q96BH1 AL359504.2-201ENST00000605506 1601 ntBASIC25.41■■□□□ 1.66
RNF25Q96BH1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF25Q96BH1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF25Q96BH1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF25Q96BH1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF25Q96BH1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF25Q96BH1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.39■■□□□ 1.66
RNF25Q96BH1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF25Q96BH1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF25Q96BH1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF25Q96BH1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF25Q96BH1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.39■■□□□ 1.65
RNF25Q96BH1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNF25Q96BH1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
RNF25Q96BH1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
RNF25Q96BH1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.38■■□□□ 1.65
RNF25Q96BH1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF25Q96BH1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF25Q96BH1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.37■■□□□ 1.65
RNF25Q96BH1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
RNF25Q96BH1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.37■■□□□ 1.65
RNF25Q96BH1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RNF25Q96BH1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF25Q96BH1 AC093323.1-202ENST00000635031 2045 ntBASIC25.36■■□□□ 1.65
RNF25Q96BH1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.36■■□□□ 1.65
RNF25Q96BH1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF25Q96BH1 MIR7108-201ENST00000614319 87 ntBASIC25.36■■□□□ 1.65
RNF25Q96BH1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.36■■□□□ 1.65
RNF25Q96BH1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
RNF25Q96BH1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF25Q96BH1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
RNF25Q96BH1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
RNF25Q96BH1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.35■■□□□ 1.65
RNF25Q96BH1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
RNF25Q96BH1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF25Q96BH1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
RNF25Q96BH1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RNF25Q96BH1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RNF25Q96BH1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.34■■□□□ 1.65
RNF25Q96BH1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RNF25Q96BH1 AC010501.1-201ENST00000606270 1962 ntBASIC25.34■■□□□ 1.65
RNF25Q96BH1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
RNF25Q96BH1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.33■■□□□ 1.65
RNF25Q96BH1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms