Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 YPR196WYPR196W 1413 nt6.84□□□□□ -1.32
DNL4Q08387 SLX5YDL013W 1860 nt6.83□□□□□ -1.32
DNL4Q08387 DSF1YEL070W 1509 nt6.83□□□□□ -1.32
DNL4Q08387 YNR073CYNR073C 1509 nt6.83□□□□□ -1.32
DNL4Q08387 MTR3YGR158C 753 nt6.83□□□□□ -1.32
DNL4Q08387 AIM2YAL049C 741 nt6.83□□□□□ -1.32
DNL4Q08387 RPS28AYOR167C 204 nt6.83□□□□□ -1.32
DNL4Q08387 HVG1YER039C 750 nt6.82□□□□□ -1.32
DNL4Q08387 YFL013W-AYFL013W-A 804 nt6.82□□□□□ -1.32
DNL4Q08387 GPA1YHR005C 1419 nt6.82□□□□□ -1.32
DNL4Q08387 PTC3YBL056W 1407 nt6.82□□□□□ -1.32
DNL4Q08387 AIM3YBR108W 2844 nt6.81□□□□□ -1.32
DNL4Q08387 YJR146WYJR146W 354 nt6.81□□□□□ -1.32
DNL4Q08387 RDN5-2RDN5-2 119 nt6.81□□□□□ -1.32
DNL4Q08387 RDN5-3RDN5-3 119 nt6.81□□□□□ -1.32
DNL4Q08387 RDN5-4RDN5-4 119 nt6.81□□□□□ -1.32
DNL4Q08387 RDN5-5RDN5-5 119 nt6.81□□□□□ -1.32
DNL4Q08387 ADH5YBR145W 1056 nt6.81□□□□□ -1.32
DNL4Q08387 snR82snR82 268 nt6.8□□□□□ -1.32
DNL4Q08387 STT3YGL022W 2157 nt6.8□□□□□ -1.32
DNL4Q08387 VPS24YKL041W 675 nt6.8□□□□□ -1.32
DNL4Q08387 IRC11YOR013W 471 nt6.8□□□□□ -1.32
DNL4Q08387 OPI11YPR044C 354 nt6.8□□□□□ -1.32
DNL4Q08387 LAG2YOL025W 1983 nt6.79□□□□□ -1.32
DNL4Q08387 CYC8YBR112C 2901 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)BtG(GCC)B 71 nt6.79□□□□□ -1.32
DNL4Q08387 SUF16tG(GCC)C 71 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)D1tG(GCC)D1 71 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)D2tG(GCC)D2 71 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)EtG(GCC)E 71 nt6.79□□□□□ -1.32
DNL4Q08387 SUF20tG(GCC)F1 71 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)F2tG(GCC)F2 71 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)G1tG(GCC)G1 71 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)G2tG(GCC)G2 71 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)J1tG(GCC)J1 71 nt6.79□□□□□ -1.32
DNL4Q08387 SUF23tG(GCC)J2 71 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)MtG(GCC)M 71 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)O1tG(GCC)O1 71 nt6.79□□□□□ -1.32
DNL4Q08387 SUF17tG(GCC)O2 71 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)P1tG(GCC)P1 71 nt6.79□□□□□ -1.32
DNL4Q08387 tG(GCC)P2tG(GCC)P2 71 nt6.79□□□□□ -1.32
DNL4Q08387 CTF8YHR191C 402 nt6.79□□□□□ -1.32
DNL4Q08387 ARE2YNR019W 1929 nt6.79□□□□□ -1.32
DNL4Q08387 ERG1YGR175C 1491 nt6.79□□□□□ -1.32
DNL4Q08387 PRY3YJL078C 2646 nt6.79□□□□□ -1.32
DNL4Q08387 TIM22YDL217C 624 nt6.78□□□□□ -1.32
DNL4Q08387 YGR127WYGR127W 939 nt6.78□□□□□ -1.32
DNL4Q08387 SRL2YLR082C 1179 nt6.78□□□□□ -1.32
DNL4Q08387 KSH1YNL024C-A 219 nt6.78□□□□□ -1.32
DNL4Q08387 EFT2YDR385W 2529 nt6.77□□□□□ -1.33
DNL4Q08387 EFT1YOR133W 2529 nt6.77□□□□□ -1.33
DNL4Q08387 YHL018WYHL018W 363 nt6.77□□□□□ -1.33
DNL4Q08387 DID2YKR035W-A 615 nt6.77□□□□□ -1.33
DNL4Q08387 OGG1YML060W 1131 nt6.77□□□□□ -1.33
DNL4Q08387 MET8YBR213W 825 nt6.77□□□□□ -1.33
DNL4Q08387 CEF1YMR213W 1773 nt6.77□□□□□ -1.33
DNL4Q08387 MCH2YKL221W 1422 nt6.76□□□□□ -1.33
DNL4Q08387 AAT2YLR027C 1257 nt6.76□□□□□ -1.33
DNL4Q08387 TSR3YOR006C 942 nt6.76□□□□□ -1.33
DNL4Q08387 DFR1YOR236W 636 nt6.76□□□□□ -1.33
DNL4Q08387 YPL250W-AYPL250W-A 288 nt6.76□□□□□ -1.33
DNL4Q08387 PTC4YBR125C 1182 nt6.76□□□□□ -1.33
DNL4Q08387 ECM38YLR299W 1983 nt6.76□□□□□ -1.33
DNL4Q08387 RGT2YDL138W 2292 nt6.76□□□□□ -1.33
DNL4Q08387 YGR054WYGR054W 1929 nt6.76□□□□□ -1.33
DNL4Q08387 ERS1YCR075C 783 nt6.75□□□□□ -1.33
DNL4Q08387 MOG1YJR074W 657 nt6.75□□□□□ -1.33
DNL4Q08387 YJR084WYJR084W 1272 nt6.75□□□□□ -1.33
DNL4Q08387 PSR2YLR019W 1194 nt6.75□□□□□ -1.33
DNL4Q08387 ZRT2YLR130C 1269 nt6.75□□□□□ -1.33
DNL4Q08387 EDE1YBL047C 4146 nt6.75□□□□□ -1.33
DNL4Q08387 RVB2YPL235W 1416 nt6.75□□□□□ -1.33
DNL4Q08387 PEX3YDR329C 1326 nt6.75□□□□□ -1.33
DNL4Q08387 RGD2YFL047W 2145 nt6.74□□□□□ -1.33
DNL4Q08387 IVY1YDR229W 1362 nt6.74□□□□□ -1.33
DNL4Q08387 MIA40YKL195W 1212 nt6.74□□□□□ -1.33
DNL4Q08387 FPR3YML074C 1236 nt6.74□□□□□ -1.33
DNL4Q08387 ARC35YNR035C 1029 nt6.74□□□□□ -1.33
DNL4Q08387 YOR200WYOR200W 399 nt6.74□□□□□ -1.33
DNL4Q08387 HBN1YCL026C-B 582 nt6.74□□□□□ -1.33
DNL4Q08387 ALT2YDR111C 1524 nt6.74□□□□□ -1.33
DNL4Q08387 PXL1YKR090W 2121 nt6.74□□□□□ -1.33
DNL4Q08387 NMT1YLR195C 1368 nt6.73□□□□□ -1.33
DNL4Q08387 SDH4YDR178W 546 nt6.73□□□□□ -1.33
DNL4Q08387 IRC7YFR055W 1023 nt6.73□□□□□ -1.33
DNL4Q08387 DPH5YLR172C 903 nt6.73□□□□□ -1.33
DNL4Q08387 GTO3YMR251W 1101 nt6.73□□□□□ -1.33
DNL4Q08387 LYS21YDL131W 1323 nt6.73□□□□□ -1.33
DNL4Q08387 THI4YGR144W 981 nt6.72□□□□□ -1.33
DNL4Q08387 YHR213W-AYHR213W-A 234 nt6.72□□□□□ -1.33
DNL4Q08387 MDE1YJR024C 735 nt6.72□□□□□ -1.33
DNL4Q08387 NTE1YML059C 5040 nt6.72□□□□□ -1.33
DNL4Q08387 ACS1YAL054C 2142 nt6.71□□□□□ -1.33
DNL4Q08387 PPT1YGR123C 1542 nt6.71□□□□□ -1.33
DNL4Q08387 YIL055CYIL055C 1884 nt6.71□□□□□ -1.34
DNL4Q08387 UBP13YBL067C 2244 nt6.71□□□□□ -1.34
DNL4Q08387 BIM1YER016W 1035 nt6.71□□□□□ -1.34
DNL4Q08387 TIF2YJL138C 1188 nt6.71□□□□□ -1.34
DNL4Q08387 GCN3YKR026C 918 nt6.71□□□□□ -1.34
DNL4Q08387 TIF1YKR059W 1188 nt6.71□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 21.6 ms