Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN12P56749 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN12P56749 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN12P56749 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN12P56749 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN12P56749 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN12P56749 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CLDN12P56749 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDN12P56749 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN12P56749 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CLDN12P56749 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN12P56749 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.03■□□□□ 0.96
CLDN12P56749 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN12P56749 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN12P56749 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.03■□□□□ 0.96
CLDN12P56749 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN12P56749 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CLDN12P56749 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN12P56749 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN12P56749 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN12P56749 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN12P56749 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN12P56749 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CLDN12P56749 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN12P56749 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN12P56749 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN12P56749 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
CLDN12P56749 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN12P56749 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN12P56749 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN12P56749 AL139125.2-201ENST00000623134 1869 ntBASIC21.01■□□□□ 0.95
CLDN12P56749 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CLDN12P56749 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN12P56749 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN12P56749 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLDN12P56749 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN12P56749 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN12P56749 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLDN12P56749 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN12P56749 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN12P56749 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLDN12P56749 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN12P56749 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN12P56749 MIR3665-201ENST00000578708 105 ntBASIC20.99■□□□□ 0.95
CLDN12P56749 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN12P56749 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN12P56749 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN12P56749 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN12P56749 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.98■□□□□ 0.95
CLDN12P56749 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN12P56749 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.98■□□□□ 0.95
CLDN12P56749 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CLDN12P56749 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN12P56749 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN12P56749 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.97■□□□□ 0.95
CLDN12P56749 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN12P56749 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN12P56749 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN12P56749 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN12P56749 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN12P56749 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN12P56749 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN12P56749 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN12P56749 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN12P56749 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN12P56749 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN12P56749 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CLDN12P56749 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN12P56749 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLDN12P56749 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.96■□□□□ 0.95
CLDN12P56749 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN12P56749 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN12P56749 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN12P56749 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN12P56749 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN12P56749 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN12P56749 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.94■□□□□ 0.94
CLDN12P56749 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN12P56749 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN12P56749 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN12P56749 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLDN12P56749 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN12P56749 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN12P56749 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN12P56749 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.94■□□□□ 0.94
CLDN12P56749 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN12P56749 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN12P56749 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN12P56749 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN12P56749 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CLDN12P56749 AC096887.2-201ENST00000623443 1957 ntBASIC20.93■□□□□ 0.94
CLDN12P56749 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN12P56749 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN12P56749 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CLDN12P56749 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN12P56749 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.92■□□□□ 0.94
CLDN12P56749 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN12P56749 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDN12P56749 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN12P56749 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms