Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 ATG23YLR431C 1362 nt5.42□□□□□ -1.54
CDC40P40968 NOP2YNL061W 1857 nt5.41□□□□□ -1.54
CDC40P40968 TAH18YPR048W 1872 nt5.41□□□□□ -1.54
CDC40P40968 XBP1YIL101C 1944 nt5.41□□□□□ -1.54
CDC40P40968 EDC2YER035W 438 nt5.41□□□□□ -1.54
CDC40P40968 PDB1YBR221C 1101 nt5.41□□□□□ -1.54
CDC40P40968 NPL6YMR091C 1308 nt5.41□□□□□ -1.54
CDC40P40968 SKN1YGR143W 2316 nt5.41□□□□□ -1.54
CDC40P40968 ERG7YHR072W 2196 nt5.4□□□□□ -1.54
CDC40P40968 CYS4YGR155W 1524 nt5.4□□□□□ -1.54
CDC40P40968 TIM22YDL217C 624 nt5.4□□□□□ -1.54
CDC40P40968 TRS31YDR472W 852 nt5.4□□□□□ -1.54
CDC40P40968 SUF5tG(CCC)O 72 nt5.4□□□□□ -1.54
CDC40P40968 DUS4YLR405W 1104 nt5.4□□□□□ -1.54
CDC40P40968 TOS6YNL300W 309 nt5.4□□□□□ -1.54
CDC40P40968 ESC8YOL017W 2145 nt5.4□□□□□ -1.54
CDC40P40968 FOB1YDR110W 1701 nt5.4□□□□□ -1.55
CDC40P40968 MKC7YDR144C 1791 nt5.39□□□□□ -1.55
CDC40P40968 PNS1YOR161C 1620 nt5.39□□□□□ -1.55
CDC40P40968 MPM1YJL066C 759 nt5.39□□□□□ -1.55
CDC40P40968 YKR032WYKR032W 315 nt5.39□□□□□ -1.55
CDC40P40968 CPT1YNL130C 1182 nt5.39□□□□□ -1.55
CDC40P40968 ELP4YPL101W 1371 nt5.39□□□□□ -1.55
CDC40P40968 NUP53YMR153W 1428 nt5.39□□□□□ -1.55
CDC40P40968 HOS1YPR068C 1413 nt5.39□□□□□ -1.55
CDC40P40968 VNX1YNL321W 2727 nt5.39□□□□□ -1.55
CDC40P40968 CRZ1YNL027W 2037 nt5.38□□□□□ -1.55
CDC40P40968 PSA1YDL055C 1086 nt5.38□□□□□ -1.55
CDC40P40968 YDR476CYDR476C 675 nt5.38□□□□□ -1.55
CDC40P40968 YJL171CYJL171C 1191 nt5.38□□□□□ -1.55
CDC40P40968 SLD7YOR060C 774 nt5.38□□□□□ -1.55
CDC40P40968 DSC3YOR223W 879 nt5.38□□□□□ -1.55
CDC40P40968 NTE1YML059C 5040 nt5.38□□□□□ -1.55
CDC40P40968 UME1YPL139C 1383 nt5.38□□□□□ -1.55
CDC40P40968 DMC1YER179W 1005 nt5.37□□□□□ -1.55
CDC40P40968 OAC1YKL120W 975 nt5.37□□□□□ -1.55
CDC40P40968 COX17YLL009C 210 nt5.37□□□□□ -1.55
CDC40P40968 FUS3YBL016W 1062 nt5.37□□□□□ -1.55
CDC40P40968 ATP23YNR020C 813 nt5.37□□□□□ -1.55
CDC40P40968 YDR415CYDR415C 1125 nt5.36□□□□□ -1.55
CDC40P40968 YJL211CYJL211C 444 nt5.36□□□□□ -1.55
CDC40P40968 ADE1YAR015W 921 nt5.36□□□□□ -1.55
CDC40P40968 AVO2YMR068W 1281 nt5.36□□□□□ -1.55
CDC40P40968 SEC17YBL050W 879 nt5.36□□□□□ -1.55
CDC40P40968 YDR387CYDR387C 1668 nt5.36□□□□□ -1.55
CDC40P40968 STB5YHR178W 2232 nt5.36□□□□□ -1.55
CDC40P40968 AAP1YHR047C 2571 nt5.35□□□□□ -1.55
CDC40P40968 YDR514CYDR514C 1452 nt5.35□□□□□ -1.55
CDC40P40968 YCR049CYCR049C 447 nt5.35□□□□□ -1.55
CDC40P40968 COX9YDL067C 180 nt5.35□□□□□ -1.55
CDC40P40968 GPI11YDR302W 660 nt5.35□□□□□ -1.55
CDC40P40968 SKP1YDR328C 585 nt5.35□□□□□ -1.55
CDC40P40968 STS1YIR011C 960 nt5.35□□□□□ -1.55
CDC40P40968 ATG17YLR423C 1254 nt5.35□□□□□ -1.55
CDC40P40968 YOR268CYOR268C 399 nt5.35□□□□□ -1.55
CDC40P40968 CWC27YPL064C 906 nt5.35□□□□□ -1.55
CDC40P40968 ERV2YPR037C 591 nt5.35□□□□□ -1.55
CDC40P40968 HEM1YDR232W 1647 nt5.34□□□□□ -1.55
CDC40P40968 FLC3YGL139W 2409 nt5.34□□□□□ -1.55
CDC40P40968 CRP1YHR146W 1398 nt5.34□□□□□ -1.55
CDC40P40968 YOL036WYOL036W 2286 nt5.34□□□□□ -1.55
CDC40P40968 YDR396WYDR396W 501 nt5.34□□□□□ -1.55
CDC40P40968 PET117YER058W 324 nt5.34□□□□□ -1.55
CDC40P40968 HAC1YFL031W 717 nt5.34□□□□□ -1.55
CDC40P40968 ARP1YHR129C 1155 nt5.34□□□□□ -1.55
CDC40P40968 CCW12YLR110C 402 nt5.34□□□□□ -1.55
CDC40P40968 YML131WYML131W 1098 nt5.34□□□□□ -1.55
CDC40P40968 YBR027CYBR027C 333 nt5.34□□□□□ -1.55
CDC40P40968 PAT1YCR077C 2391 nt5.34□□□□□ -1.56
CDC40P40968 RNR3YIL066C 2610 nt5.33□□□□□ -1.56
CDC40P40968 UTR2YEL040W 1404 nt5.33□□□□□ -1.56
CDC40P40968 SAC6YDR129C 1929 nt5.33□□□□□ -1.56
CDC40P40968 URH1YDR400W 1023 nt5.33□□□□□ -1.56
CDC40P40968 CCZ1YBR131W 2115 nt5.33□□□□□ -1.56
CDC40P40968 HAS1YMR290C 1518 nt5.33□□□□□ -1.56
CDC40P40968 PFK2YMR205C 2880 nt5.32□□□□□ -1.56
CDC40P40968 CNM67YNL225C 1746 nt5.32□□□□□ -1.56
CDC40P40968 CDC34YDR054C 888 nt5.32□□□□□ -1.56
CDC40P40968 tL(UAA)B1tL(UAA)B1 84 nt5.32□□□□□ -1.56
CDC40P40968 tL(UAA)B2tL(UAA)B2 84 nt5.32□□□□□ -1.56
CDC40P40968 tL(UAA)DtL(UAA)D 84 nt5.32□□□□□ -1.56
CDC40P40968 SUP51tL(UAA)J 84 nt5.32□□□□□ -1.56
CDC40P40968 tL(UAA)KtL(UAA)K 84 nt5.32□□□□□ -1.56
CDC40P40968 tL(UAA)LtL(UAA)L 84 nt5.32□□□□□ -1.56
CDC40P40968 tL(UAA)NtL(UAA)N 84 nt5.32□□□□□ -1.56
CDC40P40968 NCA3YJL116C 1014 nt5.32□□□□□ -1.56
CDC40P40968 MOD5YOR274W 1287 nt5.32□□□□□ -1.56
CDC40P40968 SDH8YBR269C 417 nt5.32□□□□□ -1.56
CDC40P40968 PET112YBL080C 1626 nt5.32□□□□□ -1.56
CDC40P40968 FHL1YPR104C 2811 nt5.32□□□□□ -1.56
CDC40P40968 QNS1YHR074W 2145 nt5.32□□□□□ -1.56
CDC40P40968 MTC5YDR128W 3447 nt5.32□□□□□ -1.56
CDC40P40968 YPT1YFL038C 621 nt5.31□□□□□ -1.56
CDC40P40968 IRC11YOR013W 471 nt5.31□□□□□ -1.56
CDC40P40968 PEX32YBR168W 1242 nt5.31□□□□□ -1.56
CDC40P40968 OSM1YJR051W 1506 nt5.31□□□□□ -1.56
CDC40P40968 FET3YMR058W 1911 nt5.31□□□□□ -1.56
CDC40P40968 GUS1YGL245W 2127 nt5.3□□□□□ -1.56
CDC40P40968 EEB1YPL095C 1371 nt5.3□□□□□ -1.56
CDC40P40968 MRC1YCL061C 3291 nt5.3□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 63.8 ms