Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 YLR123CYLR123C 330 nt9.15□□□□□ -0.94
SSM4P40318 MRPL10YNL284C 969 nt9.15□□□□□ -0.94
SSM4P40318 TMT1YER175C 900 nt9.14□□□□□ -0.95
SSM4P40318 YHR213W-AYHR213W-A 234 nt9.13□□□□□ -0.95
SSM4P40318 DOT5YIL010W 648 nt9.13□□□□□ -0.95
SSM4P40318 RPP1YHR062C 882 nt9.12□□□□□ -0.95
SSM4P40318 YKR032WYKR032W 315 nt9.12□□□□□ -0.95
SSM4P40318 ECM31YBR176W 939 nt9.12□□□□□ -0.95
SSM4P40318 PMT3YOR321W 2262 nt9.11□□□□□ -0.95
SSM4P40318 BUG1YDL099W 1026 nt9.11□□□□□ -0.95
SSM4P40318 YTP1YNL237W 1380 nt9.11□□□□□ -0.95
SSM4P40318 YNL097W-AYNL097W-A 156 nt9.1□□□□□ -0.95
SSM4P40318 FRT1YOR324C 1809 nt9.1□□□□□ -0.95
SSM4P40318 MED6YHR058C 888 nt9.09□□□□□ -0.95
SSM4P40318 POX1YGL205W 2247 nt9.09□□□□□ -0.95
SSM4P40318 RAD59YDL059C 717 nt9.08□□□□□ -0.96
SSM4P40318 AIM24YJR080C 1185 nt9.08□□□□□ -0.96
SSM4P40318 MEH1YKR007W 555 nt9.08□□□□□ -0.96
SSM4P40318 MCM5YLR274W 2328 nt9.08□□□□□ -0.96
SSM4P40318 ECM38YLR299W 1983 nt9.08□□□□□ -0.96
SSM4P40318 ILV1YER086W 1731 nt9.08□□□□□ -0.96
SSM4P40318 YIR042CYIR042C 711 nt9.07□□□□□ -0.96
SSM4P40318 RPS3YNL178W 723 nt9.07□□□□□ -0.96
SSM4P40318 RPS28AYOR167C 204 nt9.07□□□□□ -0.96
SSM4P40318 YPL102CYPL102C 303 nt9.07□□□□□ -0.96
SSM4P40318 ADE17YMR120C 1779 nt9.07□□□□□ -0.96
SSM4P40318 ERG1YGR175C 1491 nt9.07□□□□□ -0.96
SSM4P40318 HSP12YFL014W 330 nt9.06□□□□□ -0.96
SSM4P40318 ECM14YHR132C 1293 nt9.06□□□□□ -0.96
SSM4P40318 LYS21YDL131W 1323 nt9.06□□□□□ -0.96
SSM4P40318 YDL085C-AYDL085C-A 207 nt9.05□□□□□ -0.96
SSM4P40318 YJR084WYJR084W 1272 nt9.05□□□□□ -0.96
SSM4P40318 RKI1YOR095C 777 nt9.05□□□□□ -0.96
SSM4P40318 CTF3YLR381W 2202 nt9.04□□□□□ -0.96
SSM4P40318 NHA1YLR138W 2958 nt9.04□□□□□ -0.96
SSM4P40318 YPR204WYPR204W 3099 nt9.04□□□□□ -0.96
SSM4P40318 GTB1YDR221W 2109 nt9.04□□□□□ -0.96
SSM4P40318 MOG1YJR074W 657 nt9.04□□□□□ -0.96
SSM4P40318 AAT2YLR027C 1257 nt9.04□□□□□ -0.96
SSM4P40318 COX5AYNL052W 462 nt9.04□□□□□ -0.96
SSM4P40318 SMK1YPR054W 1167 nt9.04□□□□□ -0.96
SSM4P40318 SES1YDR023W 1389 nt9.02□□□□□ -0.97
SSM4P40318 LCB3YJL134W 1230 nt9.02□□□□□ -0.97
SSM4P40318 QRI5YLR204W 336 nt9.02□□□□□ -0.97
SSM4P40318 GID7YCL039W 2238 nt9.02□□□□□ -0.97
SSM4P40318 YDR306CYDR306C 1437 nt9.01□□□□□ -0.97
SSM4P40318 ARG81YML099C 2643 nt9.01□□□□□ -0.97
SSM4P40318 YOR389WYOR389W 1875 nt9.01□□□□□ -0.97
SSM4P40318 YET3YDL072C 612 nt9.01□□□□□ -0.97
SSM4P40318 SUF5tG(CCC)O 72 nt9.01□□□□□ -0.97
SSM4P40318 COQ3YOL096C 939 nt9.01□□□□□ -0.97
SSM4P40318 TSR3YOR006C 942 nt9.01□□□□□ -0.97
SSM4P40318 ALR1YOL130W 2580 nt9□□□□□ -0.97
SSM4P40318 RIX7YLL034C 2514 nt9□□□□□ -0.97
SSM4P40318 AFG2YLR397C 2343 nt9□□□□□ -0.97
SSM4P40318 MAK31YCR020C-A 267 nt9□□□□□ -0.97
SSM4P40318 YDL218WYDL218W 954 nt9□□□□□ -0.97
SSM4P40318 IES2YNL215W 963 nt9□□□□□ -0.97
SSM4P40318 MET8YBR213W 825 nt9□□□□□ -0.97
SSM4P40318 CRF1YDR223W 1404 nt8.99□□□□□ -0.97
SSM4P40318 YDR015CYDR015C 240 nt8.99□□□□□ -0.97
SSM4P40318 YNL285WYNL285W 372 nt8.99□□□□□ -0.97
SSM4P40318 IVY1YDR229W 1362 nt8.98□□□□□ -0.97
SSM4P40318 MCH1YDL054C 1461 nt8.97□□□□□ -0.97
SSM4P40318 QCR8YJL166W 285 nt8.97□□□□□ -0.97
SSM4P40318 JNM1YMR294W 1122 nt8.97□□□□□ -0.97
SSM4P40318 KTR1YOR099W 1182 nt8.97□□□□□ -0.97
SSM4P40318 UTP4YDR324C 2331 nt8.97□□□□□ -0.97
SSM4P40318 TRR1YDR353W 960 nt8.96□□□□□ -0.98
SSM4P40318 YLR157W-EYLR157W-E 165 nt8.96□□□□□ -0.98
SSM4P40318 RRN10YBL025W 438 nt8.96□□□□□ -0.98
SSM4P40318 SCS7YMR272C 1155 nt8.96□□□□□ -0.98
SSM4P40318 RSC4YKR008W 1878 nt8.95□□□□□ -0.98
SSM4P40318 EMP65YER140W 1671 nt8.95□□□□□ -0.98
SSM4P40318 BDF2YDL070W 1917 nt8.95□□□□□ -0.98
SSM4P40318 YCK1YHR135C 1617 nt8.94□□□□□ -0.98
SSM4P40318 PGM1YKL127W 1713 nt8.93□□□□□ -0.98
SSM4P40318 COA1YIL157C 594 nt8.93□□□□□ -0.98
SSM4P40318 ZRT2YLR130C 1269 nt8.93□□□□□ -0.98
SSM4P40318 ECM19YLR390W 339 nt8.93□□□□□ -0.98
SSM4P40318 TKL2YBR117C 2046 nt8.92□□□□□ -0.98
SSM4P40318 POP5YAL033W 522 nt8.92□□□□□ -0.98
SSM4P40318 RPS5YJR123W 678 nt8.92□□□□□ -0.98
SSM4P40318 GPA2YER020W 1350 nt8.91□□□□□ -0.98
SSM4P40318 BUD32YGR262C 786 nt8.91□□□□□ -0.98
SSM4P40318 RRS1YOR294W 612 nt8.91□□□□□ -0.98
SSM4P40318 UIP4YPL186C 915 nt8.91□□□□□ -0.98
SSM4P40318 FRE5YOR384W 2085 nt8.9□□□□□ -0.98
SSM4P40318 CDC34YDR054C 888 nt8.9□□□□□ -0.98
SSM4P40318 PHB1YGR132C 864 nt8.9□□□□□ -0.98
SSM4P40318 BSC4YNL269W 396 nt8.9□□□□□ -0.98
SSM4P40318 ICL1YER065C 1674 nt8.9□□□□□ -0.98
SSM4P40318 PEX3YDR329C 1326 nt8.9□□□□□ -0.98
SSM4P40318 EXG1YLR300W 1347 nt8.9□□□□□ -0.98
SSM4P40318 CRP1YHR146W 1398 nt8.9□□□□□ -0.99
SSM4P40318 YMR119W-AYMR119W-A 375 nt8.89□□□□□ -0.99
SSM4P40318 CAF40YNL288W 1122 nt8.89□□□□□ -0.99
SSM4P40318 RPL21AYBR191W 483 nt8.89□□□□□ -0.99
SSM4P40318 HEM14YER014W 1620 nt8.89□□□□□ -0.99
SSM4P40318 RFC1YOR217W 2586 nt8.89□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms