Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHP1P34223 YJR084WYJR084W 1272 nt7.02□□□□□ -1.29
SHP1P34223 MIA40YKL195W 1212 nt7.02□□□□□ -1.29
SHP1P34223 AAT2YLR027C 1257 nt7.02□□□□□ -1.29
SHP1P34223 CRF1YDR223W 1404 nt7.01□□□□□ -1.29
SHP1P34223 CCT3YJL014W 1605 nt7.01□□□□□ -1.29
SHP1P34223 RDN5-2RDN5-2 119 nt7.01□□□□□ -1.29
SHP1P34223 RDN5-3RDN5-3 119 nt7.01□□□□□ -1.29
SHP1P34223 RDN5-4RDN5-4 119 nt7.01□□□□□ -1.29
SHP1P34223 RDN5-5RDN5-5 119 nt7.01□□□□□ -1.29
SHP1P34223 ERS1YCR075C 783 nt7□□□□□ -1.29
SHP1P34223 MTR3YGR158C 753 nt7□□□□□ -1.29
SHP1P34223 YNL120CYNL120C 486 nt7□□□□□ -1.29
SHP1P34223 YPL250W-AYPL250W-A 288 nt7□□□□□ -1.29
SHP1P34223 HEM1YDR232W 1647 nt7□□□□□ -1.29
SHP1P34223 PPT1YGR123C 1542 nt7□□□□□ -1.29
SHP1P34223 YNL040WYNL040W 1371 nt6.99□□□□□ -1.29
SHP1P34223 GPH1YPR160W 2709 nt6.99□□□□□ -1.29
SHP1P34223 MAK31YCR020C-A 267 nt6.99□□□□□ -1.29
SHP1P34223 YDR015CYDR015C 240 nt6.99□□□□□ -1.29
SHP1P34223 ECM31YBR176W 939 nt6.99□□□□□ -1.29
SHP1P34223 HBN1YCL026C-B 582 nt6.99□□□□□ -1.29
SHP1P34223 YEL023CYEL023C 2049 nt6.99□□□□□ -1.29
SHP1P34223 EDE1YBL047C 4146 nt6.99□□□□□ -1.29
SHP1P34223 AFG2YLR397C 2343 nt6.98□□□□□ -1.29
SHP1P34223 AMD2YDR242W 1650 nt6.98□□□□□ -1.29
SHP1P34223 MLS1YNL117W 1665 nt6.98□□□□□ -1.29
SHP1P34223 ENV7YPL236C 1095 nt6.98□□□□□ -1.29
SHP1P34223 LDB16YCL005W 771 nt6.98□□□□□ -1.29
SHP1P34223 YDL085C-AYDL085C-A 207 nt6.97□□□□□ -1.29
SHP1P34223 EGD2YHR193C 525 nt6.97□□□□□ -1.29
SHP1P34223 YNL017CYNL017C 339 nt6.97□□□□□ -1.29
SHP1P34223 MSB3YNL293W 1902 nt6.97□□□□□ -1.29
SHP1P34223 HXT13YEL069C 1695 nt6.96□□□□□ -1.29
SHP1P34223 YER137CYER137C 447 nt6.96□□□□□ -1.3
SHP1P34223 SYF2YGR129W 648 nt6.96□□□□□ -1.3
SHP1P34223 SUR7YML052W 909 nt6.96□□□□□ -1.3
SHP1P34223 KSH1YNL024C-A 219 nt6.96□□□□□ -1.3
SHP1P34223 CSL4YNL232W 879 nt6.96□□□□□ -1.3
SHP1P34223 ATO2YNR002C 849 nt6.96□□□□□ -1.3
SHP1P34223 YBR241CYBR241C 1467 nt6.96□□□□□ -1.3
SHP1P34223 MCH2YKL221W 1422 nt6.95□□□□□ -1.3
SHP1P34223 BUG1YDL099W 1026 nt6.95□□□□□ -1.3
SHP1P34223 MEH1YKR007W 555 nt6.95□□□□□ -1.3
SHP1P34223 SHP1YBL058W 1272 nt6.95□□□□□ -1.3
SHP1P34223 MNS1YJR131W 1650 nt6.94□□□□□ -1.3
SHP1P34223 YET3YDL072C 612 nt6.94□□□□□ -1.3
SHP1P34223 AIM2YAL049C 741 nt6.94□□□□□ -1.3
SHP1P34223 JNM1YMR294W 1122 nt6.94□□□□□ -1.3
SHP1P34223 POX1YGL205W 2247 nt6.94□□□□□ -1.3
SHP1P34223 SKS1YPL026C 1509 nt6.93□□□□□ -1.3
SHP1P34223 STF1YDL130W-A 261 nt6.93□□□□□ -1.3
SHP1P34223 YDL172CYDL172C 480 nt6.93□□□□□ -1.3
SHP1P34223 RPS5YJR123W 678 nt6.93□□□□□ -1.3
SHP1P34223 GCV3YAL044C 513 nt6.93□□□□□ -1.3
SHP1P34223 YLR126CYLR126C 756 nt6.93□□□□□ -1.3
SHP1P34223 RPS3YNL178W 723 nt6.93□□□□□ -1.3
SHP1P34223 TAH11YJR046W 1815 nt6.92□□□□□ -1.3
SHP1P34223 ECM14YHR132C 1293 nt6.92□□□□□ -1.3
SHP1P34223 YMR253CYMR253C 1245 nt6.92□□□□□ -1.3
SHP1P34223 YNR014WYNR014W 639 nt6.92□□□□□ -1.3
SHP1P34223 CBK1YNL161W 2271 nt6.92□□□□□ -1.3
SHP1P34223 MSY1YPL097W 1479 nt6.92□□□□□ -1.3
SHP1P34223 FRE5YOR384W 2085 nt6.91□□□□□ -1.3
SHP1P34223 ICL1YER065C 1674 nt6.91□□□□□ -1.3
SHP1P34223 ARC35YNR035C 1029 nt6.91□□□□□ -1.3
SHP1P34223 PEX31YGR004W 1389 nt6.91□□□□□ -1.3
SHP1P34223 GSH1YJL101C 2037 nt6.91□□□□□ -1.3
SHP1P34223 RPP1YHR062C 882 nt6.9□□□□□ -1.3
SHP1P34223 ERP5YHR110W 639 nt6.9□□□□□ -1.3
SHP1P34223 MGM101YJR144W 810 nt6.9□□□□□ -1.3
SHP1P34223 YNL200CYNL200C 741 nt6.9□□□□□ -1.3
SHP1P34223 TOS6YNL300W 309 nt6.9□□□□□ -1.3
SHP1P34223 DON1YDR273W 1098 nt6.89□□□□□ -1.31
SHP1P34223 YPT1YFL038C 621 nt6.89□□□□□ -1.31
SHP1P34223 GCN3YKR026C 918 nt6.89□□□□□ -1.31
SHP1P34223 YBR056C-BYBR056C-B 159 nt6.89□□□□□ -1.31
SHP1P34223 GUT1YHL032C 2130 nt6.88□□□□□ -1.31
SHP1P34223 MTF2YDL044C 1323 nt6.88□□□□□ -1.31
SHP1P34223 PRS2YER099C 957 nt6.88□□□□□ -1.31
SHP1P34223 COG1YGL223C 1254 nt6.88□□□□□ -1.31
SHP1P34223 FBA1YKL060C 1080 nt6.88□□□□□ -1.31
SHP1P34223 CAF40YNL288W 1122 nt6.88□□□□□ -1.31
SHP1P34223 YPR160C-AYPR160C-A 285 nt6.88□□□□□ -1.31
SHP1P34223 YDR415CYDR415C 1125 nt6.87□□□□□ -1.31
SHP1P34223 PAC10YGR078C 600 nt6.87□□□□□ -1.31
SHP1P34223 SQT1YIR012W 1296 nt6.87□□□□□ -1.31
SHP1P34223 CMK2YOL016C 1344 nt6.86□□□□□ -1.31
SHP1P34223 YLR312CYLR312C 1197 nt6.86□□□□□ -1.31
SHP1P34223 MCH1YDL054C 1461 nt6.85□□□□□ -1.31
SHP1P34223 BNA3YJL060W 1335 nt6.85□□□□□ -1.31
SHP1P34223 YGR139WYGR139W 339 nt6.85□□□□□ -1.31
SHP1P34223 THI2YBR240C 1353 nt6.84□□□□□ -1.31
SHP1P34223 DFM1YDR411C 1026 nt6.84□□□□□ -1.31
SHP1P34223 DYS1YHR068W 1164 nt6.84□□□□□ -1.31
SHP1P34223 COX16YJL003W 357 nt6.84□□□□□ -1.31
SHP1P34223 RFS1YBR052C 633 nt6.84□□□□□ -1.31
SHP1P34223 CYB2YML054C 1776 nt6.84□□□□□ -1.31
SHP1P34223 RIX7YLL034C 2514 nt6.83□□□□□ -1.32
SHP1P34223 ADE17YMR120C 1779 nt6.83□□□□□ -1.32
SHP1P34223 AQR1YNL065W 1761 nt6.83□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 82.7 ms