Protein–RNA interactions for Protein: P15172

MYOD1, Myoblast determination protein 1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYOD1P15172 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
MYOD1P15172 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.53■□□□□ 0.72
MYOD1P15172 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MYOD1P15172 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.53■□□□□ 0.72
MYOD1P15172 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MYOD1P15172 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MYOD1P15172 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MYOD1P15172 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MYOD1P15172 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MYOD1P15172 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.52■□□□□ 0.72
MYOD1P15172 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.52■□□□□ 0.72
MYOD1P15172 AL359258.2-201ENST00000564063 1566 ntBASIC19.52■□□□□ 0.71
MYOD1P15172 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MYOD1P15172 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MYOD1P15172 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.51■□□□□ 0.71
MYOD1P15172 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MYOD1P15172 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
MYOD1P15172 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MYOD1P15172 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MYOD1P15172 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MYOD1P15172 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MYOD1P15172 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MYOD1P15172 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MYOD1P15172 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.5■□□□□ 0.71
MYOD1P15172 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.5■□□□□ 0.71
MYOD1P15172 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MYOD1P15172 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.5■□□□□ 0.71
MYOD1P15172 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.5■□□□□ 0.71
MYOD1P15172 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.49■□□□□ 0.71
MYOD1P15172 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.49■□□□□ 0.71
MYOD1P15172 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MYOD1P15172 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MYOD1P15172 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
MYOD1P15172 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
MYOD1P15172 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.48■□□□□ 0.71
MYOD1P15172 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.48■□□□□ 0.71
MYOD1P15172 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.48■□□□□ 0.71
MYOD1P15172 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.48■□□□□ 0.71
MYOD1P15172 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
MYOD1P15172 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MYOD1P15172 AL359504.2-201ENST00000605506 1601 ntBASIC19.47■□□□□ 0.71
MYOD1P15172 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
MYOD1P15172 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MYOD1P15172 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MYOD1P15172 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
MYOD1P15172 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MYOD1P15172 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.46■□□□□ 0.71
MYOD1P15172 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MYOD1P15172 MIR3648-2-201ENST00000581792 180 ntBASIC19.46■□□□□ 0.71
MYOD1P15172 MIR3648-1-201ENST00000615959 180 ntBASIC19.46■□□□□ 0.71
MYOD1P15172 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MYOD1P15172 AC010501.1-201ENST00000606270 1962 ntBASIC19.46■□□□□ 0.71
MYOD1P15172 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.46■□□□□ 0.71
MYOD1P15172 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MYOD1P15172 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MYOD1P15172 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MYOD1P15172 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MYOD1P15172 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.45■□□□□ 0.7
MYOD1P15172 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MYOD1P15172 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.45■□□□□ 0.7
MYOD1P15172 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.45■□□□□ 0.7
MYOD1P15172 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MYOD1P15172 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MYOD1P15172 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
MYOD1P15172 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MYOD1P15172 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MYOD1P15172 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MYOD1P15172 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MYOD1P15172 AC016575.1-201ENST00000607026 382 ntBASIC19.44■□□□□ 0.7
MYOD1P15172 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MYOD1P15172 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MYOD1P15172 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MYOD1P15172 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MYOD1P15172 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MYOD1P15172 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.43■□□□□ 0.7
MYOD1P15172 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
MYOD1P15172 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MYOD1P15172 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MYOD1P15172 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MYOD1P15172 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MYOD1P15172 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MYOD1P15172 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MYOD1P15172 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MYOD1P15172 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.42■□□□□ 0.7
MYOD1P15172 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
MYOD1P15172 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MYOD1P15172 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.42■□□□□ 0.7
MYOD1P15172 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MYOD1P15172 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
MYOD1P15172 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
MYOD1P15172 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MYOD1P15172 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MYOD1P15172 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MYOD1P15172 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MYOD1P15172 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MYOD1P15172 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.4■□□□□ 0.7
MYOD1P15172 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MYOD1P15172 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MYOD1P15172 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MYOD1P15172 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 640.1 ms