Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC093323.1-202ENST00000635031 2045 ntBASIC19.57■□□□□ 0.72
DEFA4P12838 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA4P12838 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA4P12838 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA4P12838 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
DEFA4P12838 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
DEFA4P12838 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEFA4P12838 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEFA4P12838 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEFA4P12838 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEFA4P12838 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.56■□□□□ 0.72
DEFA4P12838 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.56■□□□□ 0.72
DEFA4P12838 WHAMMP3-201ENST00000611636 1609 ntBASIC19.55■□□□□ 0.72
DEFA4P12838 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DEFA4P12838 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DEFA4P12838 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.55■□□□□ 0.72
DEFA4P12838 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.55■□□□□ 0.72
DEFA4P12838 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DEFA4P12838 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.55■□□□□ 0.72
DEFA4P12838 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.55■□□□□ 0.72
DEFA4P12838 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.54■□□□□ 0.72
DEFA4P12838 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DEFA4P12838 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEFA4P12838 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
DEFA4P12838 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.54■□□□□ 0.72
DEFA4P12838 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEFA4P12838 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEFA4P12838 AP004609.3-201ENST00000610705 1884 ntBASIC19.54■□□□□ 0.72
DEFA4P12838 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
DEFA4P12838 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DEFA4P12838 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEFA4P12838 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DEFA4P12838 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEFA4P12838 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEFA4P12838 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DEFA4P12838 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
DEFA4P12838 AC092803.2-201ENST00000564287 1899 ntBASIC19.52■□□□□ 0.72
DEFA4P12838 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.52■□□□□ 0.72
DEFA4P12838 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
DEFA4P12838 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DEFA4P12838 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
DEFA4P12838 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DEFA4P12838 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DEFA4P12838 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DEFA4P12838 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DEFA4P12838 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.51■□□□□ 0.71
DEFA4P12838 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
DEFA4P12838 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DEFA4P12838 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DEFA4P12838 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
DEFA4P12838 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DEFA4P12838 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DEFA4P12838 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DEFA4P12838 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
DEFA4P12838 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DEFA4P12838 DUSP8P4-201ENST00000399538 1761 ntBASIC19.49■□□□□ 0.71
DEFA4P12838 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DEFA4P12838 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DEFA4P12838 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.49■□□□□ 0.71
DEFA4P12838 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.49■□□□□ 0.71
DEFA4P12838 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DEFA4P12838 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DEFA4P12838 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.48■□□□□ 0.71
DEFA4P12838 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DEFA4P12838 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DEFA4P12838 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
DEFA4P12838 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
DEFA4P12838 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DEFA4P12838 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DEFA4P12838 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DEFA4P12838 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DEFA4P12838 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DEFA4P12838 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.47■□□□□ 0.71
DEFA4P12838 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DEFA4P12838 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.47■□□□□ 0.71
DEFA4P12838 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DEFA4P12838 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DEFA4P12838 MIR219A2-201ENST00000608502 1504 ntBASIC19.46■□□□□ 0.71
DEFA4P12838 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
DEFA4P12838 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.46■□□□□ 0.71
DEFA4P12838 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DEFA4P12838 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.46■□□□□ 0.71
DEFA4P12838 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.46■□□□□ 0.71
DEFA4P12838 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DEFA4P12838 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DEFA4P12838 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DEFA4P12838 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DEFA4P12838 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DEFA4P12838 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.44■□□□□ 0.7
DEFA4P12838 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DEFA4P12838 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.44■□□□□ 0.7
DEFA4P12838 AC148477.6-201ENST00000623746 465 ntBASIC19.44■□□□□ 0.7
DEFA4P12838 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.44■□□□□ 0.7
DEFA4P12838 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DEFA4P12838 AC142472.1-201ENST00000612013 1741 ntBASIC19.44■□□□□ 0.7
DEFA4P12838 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DEFA4P12838 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DEFA4P12838 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DEFA4P12838 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DEFA4P12838 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms