Protein–RNA interactions for Protein: P0CB38

PABPC4L, Polyadenylate-binding protein 4-like, humanhuman

Known RBP Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4LP0CB38 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PABPC4LP0CB38 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PABPC4LP0CB38 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
PABPC4LP0CB38 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
PABPC4LP0CB38 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PABPC4LP0CB38 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PABPC4LP0CB38 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PABPC4LP0CB38 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.15■■□□□ 1.3
PABPC4LP0CB38 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.15■■□□□ 1.3
PABPC4LP0CB38 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PABPC4LP0CB38 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PABPC4LP0CB38 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.15■■□□□ 1.3
PABPC4LP0CB38 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.15■■□□□ 1.3
PABPC4LP0CB38 LINC01971-201ENST00000617888 1048 ntBASIC23.15■■□□□ 1.3
PABPC4LP0CB38 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.15■■□□□ 1.3
PABPC4LP0CB38 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PABPC4LP0CB38 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PABPC4LP0CB38 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PABPC4LP0CB38 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PABPC4LP0CB38 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PABPC4LP0CB38 ERN1-208ENST00000606895 2068 ntBASIC23.13■■□□□ 1.29
PABPC4LP0CB38 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PABPC4LP0CB38 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.13■■□□□ 1.29
PABPC4LP0CB38 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.13■■□□□ 1.29
PABPC4LP0CB38 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PABPC4LP0CB38 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PABPC4LP0CB38 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PABPC4LP0CB38 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PABPC4LP0CB38 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PABPC4LP0CB38 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PABPC4LP0CB38 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PABPC4LP0CB38 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PABPC4LP0CB38 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PABPC4LP0CB38 AC079834.2-201ENST00000609776 1949 ntBASIC23.11■■□□□ 1.29
PABPC4LP0CB38 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PABPC4LP0CB38 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.11■■□□□ 1.29
PABPC4LP0CB38 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PABPC4LP0CB38 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PABPC4LP0CB38 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.1■■□□□ 1.29
PABPC4LP0CB38 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PABPC4LP0CB38 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PABPC4LP0CB38 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
PABPC4LP0CB38 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PABPC4LP0CB38 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PABPC4LP0CB38 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PABPC4LP0CB38 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PABPC4LP0CB38 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PABPC4LP0CB38 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PABPC4LP0CB38 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.29
PABPC4LP0CB38 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PABPC4LP0CB38 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PABPC4LP0CB38 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
PABPC4LP0CB38 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.08■■□□□ 1.29
PABPC4LP0CB38 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PABPC4LP0CB38 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PABPC4LP0CB38 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PABPC4LP0CB38 CLDN5-201ENST00000403084 2357 ntBASIC23.08■■□□□ 1.29
PABPC4LP0CB38 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PABPC4LP0CB38 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.07■■□□□ 1.28
PABPC4LP0CB38 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.07■■□□□ 1.28
PABPC4LP0CB38 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.07■■□□□ 1.28
PABPC4LP0CB38 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.06■■□□□ 1.28
PABPC4LP0CB38 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PABPC4LP0CB38 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PABPC4LP0CB38 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PABPC4LP0CB38 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PABPC4LP0CB38 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.05■■□□□ 1.28
PABPC4LP0CB38 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.05■■□□□ 1.28
PABPC4LP0CB38 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.05■■□□□ 1.28
PABPC4LP0CB38 DUX4L11-201ENST00000611504 1267 ntBASIC23.05■■□□□ 1.28
PABPC4LP0CB38 DUX4L12-201ENST00000614593 1267 ntBASIC23.05■■□□□ 1.28
PABPC4LP0CB38 DUX4L14-201ENST00000621227 1267 ntBASIC23.05■■□□□ 1.28
PABPC4LP0CB38 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PABPC4LP0CB38 AC092803.2-201ENST00000564287 1899 ntBASIC23.05■■□□□ 1.28
PABPC4LP0CB38 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.04■■□□□ 1.28
PABPC4LP0CB38 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PABPC4LP0CB38 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PABPC4LP0CB38 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PABPC4LP0CB38 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PABPC4LP0CB38 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PABPC4LP0CB38 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PABPC4LP0CB38 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PABPC4LP0CB38 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PABPC4LP0CB38 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PABPC4LP0CB38 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PABPC4LP0CB38 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PABPC4LP0CB38 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PABPC4LP0CB38 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.02■■□□□ 1.28
PABPC4LP0CB38 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.02■■□□□ 1.28
PABPC4LP0CB38 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.02■■□□□ 1.28
PABPC4LP0CB38 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
PABPC4LP0CB38 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.02■■□□□ 1.28
PABPC4LP0CB38 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PABPC4LP0CB38 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PABPC4LP0CB38 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PABPC4LP0CB38 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PABPC4LP0CB38 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.01■■□□□ 1.27
PABPC4LP0CB38 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.01■■□□□ 1.27
PABPC4LP0CB38 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23■■□□□ 1.27
PABPC4LP0CB38 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms