Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.79■■□□□ 1.08
GYPBP06028 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
GYPBP06028 MIR219A2-201ENST00000608502 1504 ntBASIC21.79■■□□□ 1.08
GYPBP06028 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GYPBP06028 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GYPBP06028 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
GYPBP06028 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GYPBP06028 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.78■■□□□ 1.08
GYPBP06028 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.78■■□□□ 1.08
GYPBP06028 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.78■■□□□ 1.08
GYPBP06028 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GYPBP06028 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
GYPBP06028 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
GYPBP06028 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
GYPBP06028 DUX4L11-201ENST00000611504 1267 ntBASIC21.77■■□□□ 1.08
GYPBP06028 DUX4L12-201ENST00000614593 1267 ntBASIC21.77■■□□□ 1.08
GYPBP06028 DUX4L14-201ENST00000621227 1267 ntBASIC21.77■■□□□ 1.08
GYPBP06028 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.77■■□□□ 1.07
GYPBP06028 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GYPBP06028 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.76■■□□□ 1.07
GYPBP06028 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
GYPBP06028 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
GYPBP06028 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.75■■□□□ 1.07
GYPBP06028 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GYPBP06028 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GYPBP06028 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
GYPBP06028 AC008813.1-201ENST00000536597 885 ntBASIC21.75■■□□□ 1.07
GYPBP06028 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GYPBP06028 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GYPBP06028 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GYPBP06028 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GYPBP06028 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GYPBP06028 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GYPBP06028 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GYPBP06028 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
GYPBP06028 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GYPBP06028 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GYPBP06028 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.73■■□□□ 1.07
GYPBP06028 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GYPBP06028 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GYPBP06028 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GYPBP06028 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GYPBP06028 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GYPBP06028 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GYPBP06028 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GYPBP06028 HLA-V-202ENST00000446817 847 ntBASIC21.71■■□□□ 1.07
GYPBP06028 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GYPBP06028 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GYPBP06028 AC148477.6-201ENST00000623746 465 ntBASIC21.71■■□□□ 1.07
GYPBP06028 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
GYPBP06028 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GYPBP06028 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.07
GYPBP06028 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GYPBP06028 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GYPBP06028 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GYPBP06028 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GYPBP06028 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GYPBP06028 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.7■■□□□ 1.06
GYPBP06028 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.7■■□□□ 1.06
GYPBP06028 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GYPBP06028 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GYPBP06028 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.69■■□□□ 1.06
GYPBP06028 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GYPBP06028 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GYPBP06028 AL359258.2-201ENST00000564063 1566 ntBASIC21.69■■□□□ 1.06
GYPBP06028 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
GYPBP06028 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.68■■□□□ 1.06
GYPBP06028 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
GYPBP06028 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GYPBP06028 ZNRF2P2-203ENST00000454624 420 ntBASIC21.68■■□□□ 1.06
GYPBP06028 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.68■■□□□ 1.06
GYPBP06028 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
GYPBP06028 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GYPBP06028 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.68■■□□□ 1.06
GYPBP06028 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.67■■□□□ 1.06
GYPBP06028 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GYPBP06028 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
GYPBP06028 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GYPBP06028 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GYPBP06028 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.67■■□□□ 1.06
GYPBP06028 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GYPBP06028 AC093323.1-202ENST00000635031 2045 ntBASIC21.67■■□□□ 1.06
GYPBP06028 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GYPBP06028 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GYPBP06028 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GYPBP06028 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
GYPBP06028 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GYPBP06028 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GYPBP06028 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GYPBP06028 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.65■■□□□ 1.06
GYPBP06028 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GYPBP06028 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
GYPBP06028 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GYPBP06028 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GYPBP06028 AL359504.2-201ENST00000605506 1601 ntBASIC21.65■■□□□ 1.06
GYPBP06028 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
GYPBP06028 AC096887.2-201ENST00000623443 1957 ntBASIC21.65■■□□□ 1.06
GYPBP06028 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GYPBP06028 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.64■■□□□ 1.06
GYPBP06028 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms