Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RBFOX3A6NFN3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.19■□□□□ 0.66
RBFOX3A6NFN3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RBFOX3A6NFN3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RBFOX3A6NFN3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBFOX3A6NFN3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RBFOX3A6NFN3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBFOX3A6NFN3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RBFOX3A6NFN3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBFOX3A6NFN3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBFOX3A6NFN3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX3A6NFN3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.17■□□□□ 0.66
RBFOX3A6NFN3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX3A6NFN3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX3A6NFN3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.16■□□□□ 0.66
RBFOX3A6NFN3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX3A6NFN3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.16■□□□□ 0.66
RBFOX3A6NFN3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RBFOX3A6NFN3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX3A6NFN3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX3A6NFN3 WHAMMP3-201ENST00000611636 1609 ntBASIC19.16■□□□□ 0.66
RBFOX3A6NFN3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.16■□□□□ 0.66
RBFOX3A6NFN3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX3A6NFN3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX3A6NFN3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX3A6NFN3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.15■□□□□ 0.66
RBFOX3A6NFN3 AC142472.1-201ENST00000612013 1741 ntBASIC19.15■□□□□ 0.66
RBFOX3A6NFN3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX3A6NFN3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX3A6NFN3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX3A6NFN3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RBFOX3A6NFN3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RBFOX3A6NFN3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBFOX3A6NFN3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RBFOX3A6NFN3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBFOX3A6NFN3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX3A6NFN3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX3A6NFN3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX3A6NFN3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX3A6NFN3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX3A6NFN3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.13■□□□□ 0.65
RBFOX3A6NFN3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RBFOX3A6NFN3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.13■□□□□ 0.65
RBFOX3A6NFN3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.13■□□□□ 0.65
RBFOX3A6NFN3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX3A6NFN3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RBFOX3A6NFN3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RBFOX3A6NFN3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RBFOX3A6NFN3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RBFOX3A6NFN3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RBFOX3A6NFN3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RBFOX3A6NFN3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.11■□□□□ 0.65
RBFOX3A6NFN3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RBFOX3A6NFN3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RBFOX3A6NFN3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RBFOX3A6NFN3 AC097639.1-201ENST00000565519 1891 ntBASIC19.11■□□□□ 0.65
RBFOX3A6NFN3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RBFOX3A6NFN3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RBFOX3A6NFN3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RBFOX3A6NFN3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RBFOX3A6NFN3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RBFOX3A6NFN3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RBFOX3A6NFN3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RBFOX3A6NFN3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RBFOX3A6NFN3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RBFOX3A6NFN3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.1■□□□□ 0.65
RBFOX3A6NFN3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RBFOX3A6NFN3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RBFOX3A6NFN3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 AL133380.1-201ENST00000506013 324 ntBASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 LINC01124-201ENST00000409786 2117 ntBASIC19.09■□□□□ 0.65
RBFOX3A6NFN3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RBFOX3A6NFN3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RBFOX3A6NFN3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RBFOX3A6NFN3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RBFOX3A6NFN3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RBFOX3A6NFN3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RBFOX3A6NFN3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RBFOX3A6NFN3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
RBFOX3A6NFN3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RBFOX3A6NFN3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.08■□□□□ 0.64
RBFOX3A6NFN3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RBFOX3A6NFN3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RBFOX3A6NFN3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RBFOX3A6NFN3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RBFOX3A6NFN3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RBFOX3A6NFN3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.07■□□□□ 0.64
RBFOX3A6NFN3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.07■□□□□ 0.64
RBFOX3A6NFN3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RBFOX3A6NFN3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RBFOX3A6NFN3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms