Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AC138932.3-201ENST00000567634 1902 ntBASIC20.74■□□□□ 0.91
MEIS3P1A6NDR6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MEIS3P1A6NDR6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MEIS3P1A6NDR6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.73■□□□□ 0.91
MEIS3P1A6NDR6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MEIS3P1A6NDR6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.73■□□□□ 0.91
MEIS3P1A6NDR6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.72■□□□□ 0.91
MEIS3P1A6NDR6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
MEIS3P1A6NDR6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MEIS3P1A6NDR6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.72■□□□□ 0.91
MEIS3P1A6NDR6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MEIS3P1A6NDR6 AC022211.4-201ENST00000625094 2161 ntBASIC20.72■□□□□ 0.91
MEIS3P1A6NDR6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MEIS3P1A6NDR6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MEIS3P1A6NDR6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MEIS3P1A6NDR6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MEIS3P1A6NDR6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MEIS3P1A6NDR6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.71■□□□□ 0.91
MEIS3P1A6NDR6 AC110285.7-201ENST00000624417 1536 ntBASIC20.71■□□□□ 0.91
MEIS3P1A6NDR6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MEIS3P1A6NDR6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MEIS3P1A6NDR6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.71■□□□□ 0.91
MEIS3P1A6NDR6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MEIS3P1A6NDR6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
MEIS3P1A6NDR6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MEIS3P1A6NDR6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MEIS3P1A6NDR6 SUZ12P1-203ENST00000578195 985 ntBASIC20.7■□□□□ 0.9
MEIS3P1A6NDR6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.7■□□□□ 0.9
MEIS3P1A6NDR6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MEIS3P1A6NDR6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MEIS3P1A6NDR6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MEIS3P1A6NDR6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
MEIS3P1A6NDR6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
MEIS3P1A6NDR6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
MEIS3P1A6NDR6 AL139125.2-201ENST00000623134 1869 ntBASIC20.69■□□□□ 0.9
MEIS3P1A6NDR6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MEIS3P1A6NDR6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
MEIS3P1A6NDR6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MEIS3P1A6NDR6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MEIS3P1A6NDR6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MEIS3P1A6NDR6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MEIS3P1A6NDR6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
MEIS3P1A6NDR6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
MEIS3P1A6NDR6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MEIS3P1A6NDR6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MEIS3P1A6NDR6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MEIS3P1A6NDR6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MEIS3P1A6NDR6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.66■□□□□ 0.9
MEIS3P1A6NDR6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MEIS3P1A6NDR6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.66■□□□□ 0.9
MEIS3P1A6NDR6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MEIS3P1A6NDR6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MEIS3P1A6NDR6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MEIS3P1A6NDR6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MEIS3P1A6NDR6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MEIS3P1A6NDR6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.65■□□□□ 0.9
MEIS3P1A6NDR6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.65■□□□□ 0.9
MEIS3P1A6NDR6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.65■□□□□ 0.9
MEIS3P1A6NDR6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
MEIS3P1A6NDR6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MEIS3P1A6NDR6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
MEIS3P1A6NDR6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MEIS3P1A6NDR6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MEIS3P1A6NDR6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MEIS3P1A6NDR6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
MEIS3P1A6NDR6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
MEIS3P1A6NDR6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.64■□□□□ 0.89
MEIS3P1A6NDR6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MEIS3P1A6NDR6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MEIS3P1A6NDR6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.63■□□□□ 0.89
MEIS3P1A6NDR6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.63■□□□□ 0.89
MEIS3P1A6NDR6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.63■□□□□ 0.89
MEIS3P1A6NDR6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MEIS3P1A6NDR6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.63■□□□□ 0.89
MEIS3P1A6NDR6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MEIS3P1A6NDR6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MEIS3P1A6NDR6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
MEIS3P1A6NDR6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MEIS3P1A6NDR6 DUX4L28-201ENST00000623687 678 ntBASIC20.62■□□□□ 0.89
MEIS3P1A6NDR6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.62■□□□□ 0.89
MEIS3P1A6NDR6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MEIS3P1A6NDR6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MEIS3P1A6NDR6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MEIS3P1A6NDR6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MEIS3P1A6NDR6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms