Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHISA3A0PJX4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SHISA3A0PJX4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.3■■□□□ 1
SHISA3A0PJX4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SHISA3A0PJX4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SHISA3A0PJX4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SHISA3A0PJX4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SHISA3A0PJX4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.29■■□□□ 1
SHISA3A0PJX4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHISA3A0PJX4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHISA3A0PJX4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.29■■□□□ 1
SHISA3A0PJX4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHISA3A0PJX4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.29■■□□□ 1
SHISA3A0PJX4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SHISA3A0PJX4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHISA3A0PJX4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHISA3A0PJX4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
SHISA3A0PJX4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHISA3A0PJX4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.28■■□□□ 1
SHISA3A0PJX4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHISA3A0PJX4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHISA3A0PJX4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SHISA3A0PJX4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.28■■□□□ 1
SHISA3A0PJX4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SHISA3A0PJX4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.27■■□□□ 1
SHISA3A0PJX4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.27■■□□□ 1
SHISA3A0PJX4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.27■■□□□ 1
SHISA3A0PJX4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
SHISA3A0PJX4 AC005559.1-201ENST00000589661 871 ntBASIC21.27■■□□□ 1
SHISA3A0PJX4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.27■■□□□ 1
SHISA3A0PJX4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.27■■□□□ 1
SHISA3A0PJX4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SHISA3A0PJX4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.26■□□□□ 0.99
SHISA3A0PJX4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHISA3A0PJX4 AC110285.7-201ENST00000624417 1536 ntBASIC21.26■□□□□ 0.99
SHISA3A0PJX4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHISA3A0PJX4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
SHISA3A0PJX4 AC096887.2-201ENST00000623443 1957 ntBASIC21.26■□□□□ 0.99
SHISA3A0PJX4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.26■□□□□ 0.99
SHISA3A0PJX4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHISA3A0PJX4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHISA3A0PJX4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.25■□□□□ 0.99
SHISA3A0PJX4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHISA3A0PJX4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHISA3A0PJX4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHISA3A0PJX4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHISA3A0PJX4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHISA3A0PJX4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
SHISA3A0PJX4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHISA3A0PJX4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.24■□□□□ 0.99
SHISA3A0PJX4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHISA3A0PJX4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHISA3A0PJX4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHISA3A0PJX4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHISA3A0PJX4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.23■□□□□ 0.99
SHISA3A0PJX4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.23■□□□□ 0.99
SHISA3A0PJX4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.23■□□□□ 0.99
SHISA3A0PJX4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHISA3A0PJX4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.23■□□□□ 0.99
SHISA3A0PJX4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHISA3A0PJX4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.23■□□□□ 0.99
SHISA3A0PJX4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHISA3A0PJX4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SHISA3A0PJX4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHISA3A0PJX4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHISA3A0PJX4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHISA3A0PJX4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.22■□□□□ 0.99
SHISA3A0PJX4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHISA3A0PJX4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHISA3A0PJX4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHISA3A0PJX4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHISA3A0PJX4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHISA3A0PJX4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.2■□□□□ 0.98
SHISA3A0PJX4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHISA3A0PJX4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHISA3A0PJX4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHISA3A0PJX4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.2■□□□□ 0.98
SHISA3A0PJX4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.2■□□□□ 0.98
SHISA3A0PJX4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHISA3A0PJX4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHISA3A0PJX4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHISA3A0PJX4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.19■□□□□ 0.98
SHISA3A0PJX4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHISA3A0PJX4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.18■□□□□ 0.98
SHISA3A0PJX4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SHISA3A0PJX4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
SHISA3A0PJX4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHISA3A0PJX4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHISA3A0PJX4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SHISA3A0PJX4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SHISA3A0PJX4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SHISA3A0PJX4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA3A0PJX4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SHISA3A0PJX4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA3A0PJX4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA3A0PJX4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA3A0PJX4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA3A0PJX4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA3A0PJX4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.15■□□□□ 0.98
SHISA3A0PJX4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 555 ms