Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 MTDHP4-201ENST00000600287 670 ntBASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 AL773604.1-201ENST00000617417 272 ntBASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 AC068880.1-201ENST00000507289 2297 ntBASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 NOC2LP2-201ENST00000407594 1944 ntBASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 AL022326.1-202ENST00000641533 845 ntBASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX9Q9Y5X1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 HLA-J-201ENST00000462773 1622 ntBASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 RPS2P1-201ENST00000434010 821 ntBASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 HNRNPDP1-201ENST00000439535 754 ntBASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 AC079776.4-201ENST00000511039 504 ntBASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 AC025062.2-201ENST00000605477 670 ntBASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 AC067852.2-201ENST00000590513 2313 ntBASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 HLA-A-201ENST00000376802 1334 ntBASIC18.74■□□□□ 0.59
SNX9Q9Y5X1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 AC009336.1-201ENST00000608941 1553 ntBASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 AL031284.1-201ENST00000419297 478 ntBASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 SIGLEC30P-201ENST00000455569 941 ntBASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 AP001005.1-201ENST00000571755 1248 ntBASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 GNAS-203ENST00000306120 1878 ntBASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX9Q9Y5X1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms