Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC20.13■□□□□ 0.81
R3HCC1Q9Y3T6 AGGF1P2-201ENST00000426656 2106 ntBASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 TSPY26P-202ENST00000565928 3884 ntBASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 AC006116.8-202ENST00000587620 1550 ntBASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HCC1Q9Y3T6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 KRT8P7-201ENST00000533003 1432 ntBASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 AC092647.4-201ENST00000457211 535 ntBASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 AL049597.2-201ENST00000565575 961 ntBASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 AC139887.4-201ENST00000607877 719 ntBASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 AC112497.1-201ENST00000624824 639 ntBASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
R3HCC1Q9Y3T6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 AC132872.4-202ENST00000622924 2756 ntBASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 KRT18P23-201ENST00000435622 1283 ntBASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HCC1Q9Y3T6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms