Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 KRT18P65-201ENST00000439811 1286 ntBASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 KRT18P58-201ENST00000527480 1120 ntBASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 AC008608.2-201ENST00000606089 416 ntBASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
FNDC3AQ9Y2H6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 AC068880.1-201ENST00000507289 2297 ntBASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 POLD2P1-201ENST00000511220 997 ntBASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 AC009154.2-201ENST00000621177 724 ntBASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
FNDC3AQ9Y2H6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 AC132008.2-207ENST00000454517 770 ntBASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 AC022898.2-201ENST00000616822 1312 ntBASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
FNDC3AQ9Y2H6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.91■□□□□ 0.46
FNDC3AQ9Y2H6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FNDC3AQ9Y2H6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
FNDC3AQ9Y2H6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FNDC3AQ9Y2H6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FNDC3AQ9Y2H6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FNDC3AQ9Y2H6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms