Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 AL390961.4-201ENST00000623958 2535 ntBASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 AP002414.3-201ENST00000589352 1468 ntBASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 AC135050.7-201ENST00000624508 2218 ntBASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 UPF3AP3-201ENST00000420996 769 ntBASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 AL589182.2-201ENST00000619332 1049 ntBASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSX2IPQ9Y2D8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSX2IPQ9Y2D8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 SPDYE21P-201ENST00000413323 827 ntBASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 AC073592.5-201ENST00000624854 528 ntBASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX2IPQ9Y2D8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 AC073592.3-201ENST00000625118 1834 ntBASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 AC018470.1-201ENST00000624790 3129 ntBASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 AL020989.1-201ENST00000422979 469 ntBASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 KRT18P27-201ENST00000427733 1299 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms