Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
LHX6Q9UPM6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LHX6Q9UPM6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LHX6Q9UPM6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
LHX6Q9UPM6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LHX6Q9UPM6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 MIR149-201ENST00000384879 89 ntBASIC16.58■□□□□ 0.24
LHX6Q9UPM6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 SLC25A6P5-201ENST00000435663 894 ntBASIC16.58■□□□□ 0.24
LHX6Q9UPM6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 AC108073.2-201ENST00000464002 357 ntBASIC16.58■□□□□ 0.24
LHX6Q9UPM6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 AL032819.2-201ENST00000624543 2162 ntBASIC16.58■□□□□ 0.24
LHX6Q9UPM6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LHX6Q9UPM6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 EIF2S2P3-201ENST00000428356 999 ntBASIC16.57■□□□□ 0.24
LHX6Q9UPM6 ELOCP6-201ENST00000429066 328 ntBASIC16.57■□□□□ 0.24
LHX6Q9UPM6 FAM207CP-201ENST00000443486 507 ntBASIC16.57■□□□□ 0.24
LHX6Q9UPM6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 ELOCP12-201ENST00000458706 328 ntBASIC16.57■□□□□ 0.24
LHX6Q9UPM6 AC113404.2-201ENST00000507884 177 ntBASIC16.57■□□□□ 0.24
LHX6Q9UPM6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 LINC02560-201ENST00000596379 459 ntBASIC16.57■□□□□ 0.24
LHX6Q9UPM6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 AC008761.3-201ENST00000624803 892 ntBASIC16.57■□□□□ 0.24
LHX6Q9UPM6 AC105339.1-204ENST00000636249 355 ntBASIC16.57■□□□□ 0.24
LHX6Q9UPM6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LHX6Q9UPM6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AP000568.1-201ENST00000282964 442 ntBASIC16.56■□□□□ 0.24
LHX6Q9UPM6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.56■□□□□ 0.24
LHX6Q9UPM6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms