Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 HYMAI-201ENST00000635591 3347 ntBASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 AC096633.1-201ENST00000422446 749 ntBASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 KRT18P2-201ENST00000447938 1258 ntBASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 MTDHP5-201ENST00000598980 586 ntBASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 MIR1199-201ENST00000621445 119 ntBASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 AC083906.6-201ENST00000641366 219 ntBASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 AC107918.4-202ENST00000641623 219 ntBASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 AC079781.4-201ENST00000641908 219 ntBASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 KRT18P65-201ENST00000439811 1286 ntBASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 AC008687.5-201ENST00000593746 558 ntBASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 SIGLEC16-201ENST00000599858 1437 ntBASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NOTCH3Q9UM47 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.53□□□□□ -0.24
NOTCH3Q9UM47 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms