Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRFN1Q9P244 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
LRFN1Q9P244 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRFN1Q9P244 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRFN1Q9P244 AC138028.4-201ENST00000564984 1845 ntBASIC16.08■□□□□ 0.17
LRFN1Q9P244 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRFN1Q9P244 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.08■□□□□ 0.16
LRFN1Q9P244 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.08■□□□□ 0.16
LRFN1Q9P244 STK19B-204ENST00000512515 211 ntBASIC16.08■□□□□ 0.16
LRFN1Q9P244 RNA5SP415-201ENST00000517246 115 ntBASIC16.08■□□□□ 0.16
LRFN1Q9P244 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.08■□□□□ 0.16
LRFN1Q9P244 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
LRFN1Q9P244 AL589182.2-201ENST00000619332 1049 ntBASIC16.08■□□□□ 0.16
LRFN1Q9P244 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.08■□□□□ 0.16
LRFN1Q9P244 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN1Q9P244 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
LRFN1Q9P244 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 AL356488.2-201ENST00000602755 427 ntBASIC16.07■□□□□ 0.16
LRFN1Q9P244 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 Z83851.2-201ENST00000609564 659 ntBASIC16.07■□□□□ 0.16
LRFN1Q9P244 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 AC148477.5-201ENST00000625164 1645 ntBASIC16.07■□□□□ 0.16
LRFN1Q9P244 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN1Q9P244 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.07■□□□□ 0.16
LRFN1Q9P244 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 ABALON-201ENST00000629058 1903 ntBASIC16.06■□□□□ 0.16
LRFN1Q9P244 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 PMS2P7-201ENST00000506558 1336 ntBASIC16.06■□□□□ 0.16
LRFN1Q9P244 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN1Q9P244 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.06■□□□□ 0.16
LRFN1Q9P244 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms