Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC090506.2-201ENST00000624521 419 ntBASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.14■□□□□ 0.97
FOXD4L1Q9NU39 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 UNC93B2-201ENST00000285383 730 ntBASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 SEC1P-202ENST00000473944 940 ntBASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 BX088651.1-201ENST00000540551 451 ntBASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXD4L1Q9NU39 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 AL078595.1-201ENST00000404458 226 ntBASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 AP001412.1-201ENST00000608405 714 ntBASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 AC002044.3-201ENST00000623314 541 ntBASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXD4L1Q9NU39 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 PCDH8P1-201ENST00000428983 2773 ntBASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 AL117378.2-201ENST00000622916 1337 ntBASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 CCR12P-201ENST00000446203 998 ntBASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms