Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CISHQ9NSE2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CISHQ9NSE2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CISHQ9NSE2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CISHQ9NSE2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.67■□□□□ 0.58
CISHQ9NSE2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
CISHQ9NSE2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.66■□□□□ 0.58
CISHQ9NSE2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.66■□□□□ 0.58
CISHQ9NSE2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 SPDYE21P-201ENST00000413323 827 ntBASIC18.66■□□□□ 0.58
CISHQ9NSE2 RBM17P3-201ENST00000417687 1192 ntBASIC18.66■□□□□ 0.58
CISHQ9NSE2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.66■□□□□ 0.58
CISHQ9NSE2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 AC148477.5-201ENST00000625164 1645 ntBASIC18.66■□□□□ 0.58
CISHQ9NSE2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.66■□□□□ 0.58
CISHQ9NSE2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CISHQ9NSE2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CISHQ9NSE2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CISHQ9NSE2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CISHQ9NSE2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 AC079776.2-201ENST00000641154 1609 ntBASIC18.65■□□□□ 0.58
CISHQ9NSE2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 MTDHP3-201ENST00000594186 672 ntBASIC18.65■□□□□ 0.58
CISHQ9NSE2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CISHQ9NSE2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CISHQ9NSE2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CISHQ9NSE2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CISHQ9NSE2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CISHQ9NSE2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CISHQ9NSE2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CISHQ9NSE2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CISHQ9NSE2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.65■□□□□ 0.58
CISHQ9NSE2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CISHQ9NSE2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CISHQ9NSE2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CISHQ9NSE2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CISHQ9NSE2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.64■□□□□ 0.58
CISHQ9NSE2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CISHQ9NSE2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CISHQ9NSE2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CISHQ9NSE2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CISHQ9NSE2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CISHQ9NSE2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms