Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 MIR5100-201ENST00000579544 119 ntBASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN4Q9NRR5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 AC016396.2-201ENST00000562575 1417 ntBASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 PP12613-201ENST00000424958 2230 ntBASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 NUS1P2-201ENST00000417358 873 ntBASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 AD001527.2-201ENST00000622994 785 ntBASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 AL023806.1-201ENST00000603994 1649 ntBASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 FZD10-202ENST00000539839 3282 ntBASIC16.11■□□□□ 0.17
UBQLN4Q9NRR5 AC141586.5-201ENST00000624546 2050 ntBASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN4Q9NRR5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms