Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 AC100803.2-201ENST00000562459 1963 ntBASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 LINC00304-203ENST00000565008 1864 ntBASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.31■□□□□ 0.36
PFDN4Q9NQP4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 KRT18P65-201ENST00000439811 1286 ntBASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN4Q9NQP4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 PP12613-201ENST00000424958 2230 ntBASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 LINC00602-201ENST00000629776 2065 ntBASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 AC034232.1-201ENST00000506026 1064 ntBASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 AC140113.3-201ENST00000605663 199 ntBASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 AC005363.2-201ENST00000618631 242 ntBASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 AC141257.4-201ENST00000634557 245 ntBASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 AC136944.6-201ENST00000634818 245 ntBASIC17.29■□□□□ 0.36
PFDN4Q9NQP4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms