Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 ELK2BP-201ENST00000415014 1224 ntBASIC18.12■□□□□ 0.49
HPS4Q9NQG7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 AC004706.3-202ENST00000621574 984 ntBASIC18.12■□□□□ 0.49
HPS4Q9NQG7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 DNAJB3-201ENST00000446806 729 ntBASIC18.11■□□□□ 0.49
HPS4Q9NQG7 KRT18P2-201ENST00000447938 1258 ntBASIC18.11■□□□□ 0.49
HPS4Q9NQG7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 AC006504.4-201ENST00000592118 1568 ntBASIC18.11■□□□□ 0.49
HPS4Q9NQG7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.11■□□□□ 0.49
HPS4Q9NQG7 AC018470.1-201ENST00000624790 3129 ntBASIC18.11■□□□□ 0.49
HPS4Q9NQG7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 AC002347.1-201ENST00000569543 541 ntBASIC18.1■□□□□ 0.49
HPS4Q9NQG7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 AC019129.2-201ENST00000609837 1235 ntBASIC18.1■□□□□ 0.49
HPS4Q9NQG7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPS4Q9NQG7 AC093677.2-201ENST00000600169 1863 ntBASIC18.09■□□□□ 0.49
HPS4Q9NQG7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS4Q9NQG7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS4Q9NQG7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
HPS4Q9NQG7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS4Q9NQG7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS4Q9NQG7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS4Q9NQG7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HPS4Q9NQG7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.09■□□□□ 0.49
HPS4Q9NQG7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS4Q9NQG7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HPS4Q9NQG7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.09■□□□□ 0.49
HPS4Q9NQG7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms