Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 HTR7P1-202ENST00000624664 4411 ntBASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 AC006449.5-201ENST00000610658 2098 ntBASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 SLC25A3P1-201ENST00000443844 931 ntBASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 COX11P1-201ENST00000489116 835 ntBASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 AC073912.3-201ENST00000624414 853 ntBASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC52A3Q9NQ40 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 AC007967.3-201ENST00000434308 558 ntBASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 AL390719.2-201ENST00000606993 987 ntBASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC52A3Q9NQ40 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 AC026691.1-201ENST00000602502 2017 ntBASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 HBZP1-201ENST00000354915 429 ntBASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 MYCLP1-201ENST00000372451 1075 ntBASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 FAM8A6P-201ENST00000407496 1135 ntBASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 AC005332.3-201ENST00000589904 676 ntBASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms