Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 MST1L-201ENST00000442552 2185 ntBASIC18.46■□□□□ 0.55
CD248Q9HCU0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 BCL2-203ENST00000589955 5011 ntBASIC18.45■□□□□ 0.54
CD248Q9HCU0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 BNIP3P18-201ENST00000593976 575 ntBASIC18.45■□□□□ 0.54
CD248Q9HCU0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD248Q9HCU0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CD248Q9HCU0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CD248Q9HCU0 ANO7L1-203ENST00000602586 1720 ntBASIC18.44■□□□□ 0.54
CD248Q9HCU0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.44■□□□□ 0.54
CD248Q9HCU0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.44■□□□□ 0.54
CD248Q9HCU0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 TSPY12P-201ENST00000421279 868 ntBASIC18.44■□□□□ 0.54
CD248Q9HCU0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.44■□□□□ 0.54
CD248Q9HCU0 AC113404.2-201ENST00000507884 177 ntBASIC18.44■□□□□ 0.54
CD248Q9HCU0 AF238378.1-201ENST00000526806 358 ntBASIC18.44■□□□□ 0.54
CD248Q9HCU0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CD248Q9HCU0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.44■□□□□ 0.54
CD248Q9HCU0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.44■□□□□ 0.54
CD248Q9HCU0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.44■□□□□ 0.54
CD248Q9HCU0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.44■□□□□ 0.54
CD248Q9HCU0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.44■□□□□ 0.54
CD248Q9HCU0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD248Q9HCU0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
CD248Q9HCU0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 MIR149-201ENST00000384879 89 ntBASIC18.43■□□□□ 0.54
CD248Q9HCU0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms