Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 AP005018.1-201ENST00000525475 301 ntBASIC23.28■■□□□ 1.32
TRPM3Q9HCF6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRPM3Q9HCF6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRPM3Q9HCF6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC23.28■■□□□ 1.32
TRPM3Q9HCF6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRPM3Q9HCF6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRPM3Q9HCF6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 AL161645.1-201ENST00000622716 1255 ntBASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 AC004890.2-204ENST00000481968 304 ntBASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 INGX-202ENST00000489074 768 ntBASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 MNT-208ENST00000575394 606 ntTSL 4 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 SPDYE22P-201ENST00000582158 798 ntBASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC23.25■■□□□ 1.31
TRPM3Q9HCF6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 AC005412.3-201ENST00000580309 715 ntBASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 LINC00304-203ENST00000565008 1864 ntBASIC23.24■■□□□ 1.31
TRPM3Q9HCF6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRPM3Q9HCF6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.23■■□□□ 1.31
TRPM3Q9HCF6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
TRPM3Q9HCF6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRPM3Q9HCF6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRPM3Q9HCF6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms