Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 AC011467.2-201ENST00000598425 242 ntBASIC16.76■□□□□ 0.27
BRF2Q9HAW0 Z69720.1-201ENST00000601483 472 ntBASIC16.76■□□□□ 0.27
BRF2Q9HAW0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 IER3-202ENST00000376377 1350 ntBASIC16.76■□□□□ 0.27
BRF2Q9HAW0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 AC233702.3-201ENST00000578656 1387 ntBASIC16.76■□□□□ 0.27
BRF2Q9HAW0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
BRF2Q9HAW0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 AC046185.3-201ENST00000623228 1824 ntBASIC16.75■□□□□ 0.27
BRF2Q9HAW0 KRT18P1-202ENST00000452408 1331 ntBASIC16.75■□□□□ 0.27
BRF2Q9HAW0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 AP005901.3-202ENST00000581653 237 ntBASIC16.75■□□□□ 0.27
BRF2Q9HAW0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRF2Q9HAW0 AC080080.1-201ENST00000625121 2420 ntBASIC16.75■□□□□ 0.27
BRF2Q9HAW0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 KRT8P10-201ENST00000450021 1447 ntBASIC16.74■□□□□ 0.27
BRF2Q9HAW0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 AC091607.1-201ENST00000490318 1060 ntBASIC16.74■□□□□ 0.27
BRF2Q9HAW0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 STK25P1-201ENST00000585406 838 ntBASIC16.74■□□□□ 0.27
BRF2Q9HAW0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.74■□□□□ 0.27
BRF2Q9HAW0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.74■□□□□ 0.27
BRF2Q9HAW0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms