Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RPS2P28-201ENST00000314255 741 ntBASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 AC007688.1-201ENST00000475592 759 ntBASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 GUSBP12-201ENST00000513727 720 ntBASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
SCAF1Q9H7N4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 TEX21P-204ENST00000641479 1693 ntBASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
SCAF1Q9H7N4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 COA5-202ENST00000409997 557 ntTSL 4 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 IGHV3-22-201ENST00000520721 359 ntBASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 AC034105.1-201ENST00000563488 319 ntBASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 ANKRD18DP-204ENST00000455355 1975 ntBASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC26.15■■□□□ 1.78
SCAF1Q9H7N4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCAF1Q9H7N4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms