Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 AC120498.9-201ENST00000339021 3867 ntBASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 AL645728.2-201ENST00000641974 660 ntBASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH11YQ9BZA8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 HLA-DRB6-201ENST00000411500 1235 ntBASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 KRT8P48-201ENST00000515599 1220 ntBASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 FAM86C2P-203ENST00000528684 1004 ntBASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 AL139327.4-201ENST00000612362 153 ntBASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH11YQ9BZA8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 AC093503.3-201ENST00000624917 2352 ntBASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 COX20P2-201ENST00000452636 358 ntBASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 RN7SL589P-201ENST00000481268 310 ntBASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDH11YQ9BZA8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 SPDYE11-202ENST00000450699 704 ntBASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 AC067863.1-201ENST00000494933 530 ntBASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 SPDYE9P-201ENST00000570642 692 ntBASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 SPDYE10P-202ENST00000612005 668 ntBASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 SPDYE8P-202ENST00000612377 668 ntBASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PCDH11YQ9BZA8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms