Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.24■□□□□ 0.99
RPAP1Q9BWH6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 AC092910.1-201ENST00000482027 1129 ntBASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 AC108860.2-201ENST00000562760 2183 ntBASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 COX5BP2-201ENST00000392354 334 ntBASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 MTDHP4-201ENST00000600287 670 ntBASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
RPAP1Q9BWH6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 AC080080.1-201ENST00000625121 2420 ntBASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 AC010460.3-201ENST00000511359 1579 ntBASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 REXO1L11P-201ENST00000620964 1927 ntBASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 RNA5SP415-201ENST00000517246 115 ntBASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 NKAPP1-205ENST00000585790 367 ntBASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RPAP1Q9BWH6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 AC079776.2-201ENST00000641154 1609 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms