Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 MTATP6P19-201ENST00000413797 659 ntBASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 CR392000.1-201ENST00000624770 1228 ntBASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 AC063926.3-201ENST00000624734 5658 ntBASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 KRT8P7-201ENST00000533003 1432 ntBASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 HOXB1-202ENST00000577092 1414 ntBASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 DUTP2-201ENST00000519164 463 ntBASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 MIR3180-5-201ENST00000583743 153 ntBASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 AC096733.2-201ENST00000609937 1394 ntBASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 FSCN1P1-201ENST00000568912 1481 ntBASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP4Q9BWG4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.27□□□□□ -0.28
SSBP4Q9BWG4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SSBP4Q9BWG4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SSBP4Q9BWG4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SSBP4Q9BWG4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SSBP4Q9BWG4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.27□□□□□ -0.28
SSBP4Q9BWG4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP4Q9BWG4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP4Q9BWG4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 CA15P1-201ENST00000481698 905 ntBASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 AC073195.1-201ENST00000607241 877 ntBASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms