Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 AC073648.2-201ENST00000510116 352 ntBASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM62Q9BVG3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 AC016396.2-201ENST00000562575 1417 ntBASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 LYSMD4-203ENST00000378904 2122 ntBASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 AC018470.1-201ENST00000624790 3129 ntBASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM62Q9BVG3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 AF186996.4-201ENST00000467186 377 ntBASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 NKAPP1-205ENST00000585790 367 ntBASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM62Q9BVG3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM62Q9BVG3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms