Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NDC1Q9BTX1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
NDC1Q9BTX1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.76■□□□□ 0.27
NDC1Q9BTX1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NDC1Q9BTX1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NDC1Q9BTX1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NDC1Q9BTX1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NDC1Q9BTX1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NDC1Q9BTX1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.76■□□□□ 0.27
NDC1Q9BTX1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NDC1Q9BTX1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 SART3-203ENST00000546611 1184 ntBASIC16.75■□□□□ 0.27
NDC1Q9BTX1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 AD001527.2-201ENST00000622994 785 ntBASIC16.75■□□□□ 0.27
NDC1Q9BTX1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 PMPCAP1-201ENST00000508114 1576 ntBASIC16.75■□□□□ 0.27
NDC1Q9BTX1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDC1Q9BTX1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 AC018712.1-201ENST00000455767 687 ntBASIC16.74■□□□□ 0.27
NDC1Q9BTX1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 AC021087.4-201ENST00000563761 564 ntBASIC16.74■□□□□ 0.27
NDC1Q9BTX1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 NKAPP1-205ENST00000585790 367 ntBASIC16.74■□□□□ 0.27
NDC1Q9BTX1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 AC148477.8-201ENST00000624298 468 ntBASIC16.74■□□□□ 0.27
NDC1Q9BTX1 AC073592.5-201ENST00000624854 528 ntBASIC16.74■□□□□ 0.27
NDC1Q9BTX1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 AC067852.2-201ENST00000590513 2313 ntBASIC16.74■□□□□ 0.27
NDC1Q9BTX1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NDC1Q9BTX1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NDC1Q9BTX1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms