Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 KRT18P22-201ENST00000402024 1347 ntBASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 AL441883.1-201ENST00000566170 1045 ntBASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 AC005915.1-201ENST00000624912 2018 ntBASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 FLJ38576-201ENST00000623820 2459 ntBASIC14.81□□□□□ -0.04
HDHD3Q9BSH5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 AC105020.1-201ENST00000435356 2205 ntBASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 AC005104.2-201ENST00000427818 678 ntBASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 SLC25A3P1-201ENST00000443844 931 ntBASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 AC140113.3-201ENST00000605663 199 ntBASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 AC016396.2-201ENST00000562575 1417 ntBASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 LINC01311-201ENST00000565162 1445 ntBASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms