Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 PRSS29P-201ENST00000440800 595 ntBASIC16.74■□□□□ 0.27
CMKLR1Q99788 VN2R19P-201ENST00000442399 1052 ntBASIC16.74■□□□□ 0.27
CMKLR1Q99788 KRT18P2-201ENST00000447938 1258 ntBASIC16.74■□□□□ 0.27
CMKLR1Q99788 DNAJB3-202ENST00000449667 1266 ntBASIC16.74■□□□□ 0.27
CMKLR1Q99788 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 RPS15P9-201ENST00000494093 319 ntBASIC16.74■□□□□ 0.27
CMKLR1Q99788 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 AC008667.4-201ENST00000607370 168 ntBASIC16.74■□□□□ 0.27
CMKLR1Q99788 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 BX276092.7-203ENST00000637198 1536 ntBASIC16.74■□□□□ 0.27
CMKLR1Q99788 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.74■□□□□ 0.27
CMKLR1Q99788 AC148477.5-201ENST00000625164 1645 ntBASIC16.74■□□□□ 0.27
CMKLR1Q99788 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CMKLR1Q99788 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.73■□□□□ 0.27
CMKLR1Q99788 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.73■□□□□ 0.27
CMKLR1Q99788 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.73■□□□□ 0.27
CMKLR1Q99788 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 AC108073.2-201ENST00000464002 357 ntBASIC16.73■□□□□ 0.27
CMKLR1Q99788 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.73■□□□□ 0.27
CMKLR1Q99788 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.73■□□□□ 0.27
CMKLR1Q99788 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.73■□□□□ 0.27
CMKLR1Q99788 IGHV3-65-201ENST00000523210 341 ntBASIC16.73■□□□□ 0.27
CMKLR1Q99788 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.73■□□□□ 0.27
CMKLR1Q99788 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.73■□□□□ 0.27
CMKLR1Q99788 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CMKLR1Q99788 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.73■□□□□ 0.27
CMKLR1Q99788 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.73■□□□□ 0.27
CMKLR1Q99788 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CMKLR1Q99788 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.72■□□□□ 0.27
CMKLR1Q99788 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CMKLR1Q99788 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.72■□□□□ 0.27
CMKLR1Q99788 AC104581.1-202ENST00000635932 2618 ntBASIC16.72■□□□□ 0.27
CMKLR1Q99788 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.72■□□□□ 0.27
CMKLR1Q99788 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CMKLR1Q99788 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.72■□□□□ 0.27
CMKLR1Q99788 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.72■□□□□ 0.27
CMKLR1Q99788 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.72■□□□□ 0.27
CMKLR1Q99788 AP006288.1-201ENST00000446065 395 ntBASIC16.72■□□□□ 0.27
CMKLR1Q99788 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CMKLR1Q99788 STK19B-204ENST00000512515 211 ntBASIC16.72■□□□□ 0.27
CMKLR1Q99788 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CMKLR1Q99788 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.72■□□□□ 0.27
CMKLR1Q99788 AC109462.3-201ENST00000573934 613 ntBASIC16.72■□□□□ 0.27
CMKLR1Q99788 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.72■□□□□ 0.27
CMKLR1Q99788 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms