Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB3IPQ96QF0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IPQ96QF0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IPQ96QF0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RAB3IPQ96QF0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IPQ96QF0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB3IPQ96QF0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 AC104640.1-201ENST00000562617 2109 ntBASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 AC007326.2-201ENST00000624224 7579 ntBASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 AC006970.2-201ENST00000450065 779 ntBASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 AC004264.1-201ENST00000608354 794 ntBASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3IPQ96QF0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 AC092368.3-202ENST00000574180 1591 ntBASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 AL136379.1-201ENST00000623471 2642 ntBASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 AF201337.1-201ENST00000520239 748 ntBASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 RNF216P1-203ENST00000404404 2427 ntBASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 NORAD-201ENST00000565493 5339 ntBASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 AC092171.3-201ENST00000610122 2651 ntBASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB3IPQ96QF0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms