Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 ALG1L5P-201ENST00000482043 771 ntBASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 AC109462.3-201ENST00000573934 613 ntBASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 C20orf181-201ENST00000623918 480 ntBASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 LETM1P2-201ENST00000597330 2178 ntBASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNGAP1Q96PV0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 HTR5BP-201ENST00000430851 1154 ntBASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 DDX43P3-201ENST00000441064 443 ntBASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 AC026471.1-201ENST00000564629 3026 ntBASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 BX276092.7-203ENST00000637198 1536 ntBASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.85■□□□□ 0.77
SYNGAP1Q96PV0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 MIR4469-201ENST00000583919 79 ntBASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 AC010654.1-201ENST00000615722 808 ntBASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 AC004790.2-201ENST00000623588 572 ntBASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SYNGAP1Q96PV0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms