Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 HLA-J-201ENST00000462773 1622 ntBASIC18.06■□□□□ 0.48
RPRD1AQ96P16 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 AC009078.2-202ENST00000463353 338 ntBASIC18.06■□□□□ 0.48
RPRD1AQ96P16 BX005266.1-201ENST00000473402 457 ntBASIC18.06■□□□□ 0.48
RPRD1AQ96P16 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 AC073648.2-201ENST00000510116 352 ntBASIC18.06■□□□□ 0.48
RPRD1AQ96P16 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 STK19B-204ENST00000512515 211 ntBASIC18.06■□□□□ 0.48
RPRD1AQ96P16 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 NKAPP1-205ENST00000585790 367 ntBASIC18.06■□□□□ 0.48
RPRD1AQ96P16 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPRD1AQ96P16 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 AL020989.1-201ENST00000422979 469 ntBASIC18.05■□□□□ 0.48
RPRD1AQ96P16 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 AF186996.4-201ENST00000467186 377 ntBASIC18.05■□□□□ 0.48
RPRD1AQ96P16 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 AC133963.1-201ENST00000504166 1679 ntBASIC18.05■□□□□ 0.48
RPRD1AQ96P16 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPRD1AQ96P16 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 AC004817.3-201ENST00000602957 2129 ntBASIC18.04■□□□□ 0.48
RPRD1AQ96P16 AC067852.2-201ENST00000590513 2313 ntBASIC18.04■□□□□ 0.48
RPRD1AQ96P16 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 AC073592.4-201ENST00000623827 446 ntBASIC18.04■□□□□ 0.48
RPRD1AQ96P16 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 SIGLEC16-201ENST00000599858 1437 ntBASIC18.04■□□□□ 0.48
RPRD1AQ96P16 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPRD1AQ96P16 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 AC148477.5-201ENST00000625164 1645 ntBASIC18.03■□□□□ 0.48
RPRD1AQ96P16 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPRD1AQ96P16 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms